| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4564 |
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| Symbol | |
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| ID | 8360737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5709911 |
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| End bp | 5710663 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966719 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003124207 |
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| Protein GI | 256423554 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.4902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.185322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGA AATTAAACAA CAAAGTGGCA CTGGTAACCG GTGGTAGCGC AGGAATAGGA
CTGGCAATAG CTAAATTATT TGTTGCAGAA GGCGCAAAAG TAATCATCAC CGGCCGTCGG
GAAACGGTGC TTAACAAGGC AGTAGCTGAA ATAGGCAACG ACGCACTGGG TATACAGGCG
GATTCTTCCA GTCTGTCAGA CCTCGATAGC TTGTACAAAA CCATCGGTGA AAAAGTGGGT
AAAATAGATA TCCTCGTCGT TAATGCAGCT GTATATGTAC TCGCACCGCT GGCGGCTTTT
ACAGAGGAAA TGTTTGACAA ACAAAGTAAT ATCAATTTCA AGGGAACATT TTTCACTGTT
CAGAAATCTC TGAATTACCT GAATGACGGC GCCTCAGTTA TATTATTATC CTCCATCGCC
AATGAGATAG GTGTACCCAA TCACGCTTCC TATTCTGCGA CCAAAGCAGC TATCCGCTCT
TTAGGCAGAA GCTTTGCCGC CGAACTGGTA GACAGAGGTA TCCGTGTCAA TGTACTGACG
CCTGGTCCTG TTGATACCAC GGTATTTGAA CAGGTAGCAT CTTCACAGGC AGAAATAGAC
ATGATGAAGT CCGGTATGGC TGCTATGACA GCTGTAAAAA GGATCGGTAA ACCGGAAGAA
ATTGCCGCAG GTGCGCTTTT CCTGGCTTCC GACGAAGCCT CTTTTATGCT CGGGGCTGAA
CTCACGATCG ACGGTGGTAT CAAATCACTG TAG
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| Protein sequence | MAKKLNNKVA LVTGGSAGIG LAIAKLFVAE GAKVIITGRR ETVLNKAVAE IGNDALGIQA
DSSSLSDLDS LYKTIGEKVG KIDILVVNAA VYVLAPLAAF TEEMFDKQSN INFKGTFFTV
QKSLNYLNDG ASVILLSSIA NEIGVPNHAS YSATKAAIRS LGRSFAAELV DRGIRVNVLT
PGPVDTTVFE QVASSQAEID MMKSGMAAMT AVKRIGKPEE IAAGALFLAS DEASFMLGAE
LTIDGGIKSL
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