Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4484 |
Symbol | |
ID | 8360657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5575174 |
End bp | 5576214 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644966639 |
Product | nicotinate-nucleotide/ dimethylbenzimidazolephosp horibosyltransferase |
Protein accession | YP_003124127 |
Protein GI | 256423474 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0372935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACAT TCCATATTGC CCCCCTCAAC AATGATATTA CGGCGGCACT GCAACACAAG ATAGACAGCA AAACAAAACC AATTGGCTCA TTAGGACAGC TGGAAAAACT GGCTTTACAG ATCGGCCGGA TACAACAGAC ACAGACCCCT GCGCTGAATA AACCCACCAT CGTTGTTTTT GCCGGCGATC ACGGTGTTGC GCATGAAGGC GTGAGTCCTT TTCCACAGGA AGTGACCTAT CAGATGGTCT TTAATTTCCT GCAGGGCGGC GCTGCCATCA ACGTATTTAC AAAGCAGAAC GGTATTGCAA TCAAAGTCGT AGATGCGGGT GTCAACTTTG ATTTCAACCA ACATCCCGGC TTGGTACATG CTAAGGTGGC TCTGGGTACC AAAAGCTTCC TGCATGAAGC AGCCATGACG CCTGCGCAAT GTGAGACAGC CATTGAAAGA GGTGCCGCGG TTGTGAAAGA ATTACATGAA CAGGGCTGTA ATGTGATCGG ATTCGGGGAA ATGGGCATCG CCAATACCTC CGCAGCAGCA GTAATTATGA GTCTGCTCTG TGATATTCCA TTGGAACAAT GTATTGGCAG AGGTACCGGA CTGGATGACG AAGGGCTGAT CAGGAAGAAA GTGATCCTGG CAGAATCTAT GATCCGTCAT AACAAAATTG AAAAAACGCC CCTGAACGTA CTCAGTACTT TCGGTGGATT TGAAATAGCC ATGATGTGTG GCGCCATGTT ACAGGCGGCG GCAGCTGGTA TGCTGATACT GGTAGATGGT TTTATCACCA CATCTGCATT ACTGGTCGCT GCGAAGATAA ATGAGCAAAT ATTGGACTAC TGCCTGTTCA CCCACCAGTC GAACGAGCAG GGTCATAGTC TGATGCTGGC CCACCTGAAA GCTGTACCTT TATTAAGCCT GGGTATGCGC CTGGGAGAAG GTACCGGCGC TGCTGTTGCC TACCCTGTTA TACAGGCTGC TGTAAGCTTC CTGAATGAAA TGGCCAGCTT TGAATCGGCC GGTGTGTCCA ACAAAGCATA A
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Protein sequence | MTTFHIAPLN NDITAALQHK IDSKTKPIGS LGQLEKLALQ IGRIQQTQTP ALNKPTIVVF AGDHGVAHEG VSPFPQEVTY QMVFNFLQGG AAINVFTKQN GIAIKVVDAG VNFDFNQHPG LVHAKVALGT KSFLHEAAMT PAQCETAIER GAAVVKELHE QGCNVIGFGE MGIANTSAAA VIMSLLCDIP LEQCIGRGTG LDDEGLIRKK VILAESMIRH NKIEKTPLNV LSTFGGFEIA MMCGAMLQAA AAGMLILVDG FITTSALLVA AKINEQILDY CLFTHQSNEQ GHSLMLAHLK AVPLLSLGMR LGEGTGAAVA YPVIQAAVSF LNEMASFESA GVSNKA
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