Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4468 |
Symbol | |
ID | 8360641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5559891 |
End bp | 5560919 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644966623 |
Product | aminotransferase class I and II |
Protein accession | YP_003124111 |
Protein GI | 256423458 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.517965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0670224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAACG GGCACGGAGA CGACAGATAC CTGTTCAATT ATCCTGTTAA AGCCGATTTT AGTTCCAATG TATACTACGA AGGCTTGGCC GGCGGATTAC GCCAGCACCT GACTGATTGT CTCTATAAAC TGAACAACTA TCCCGAAGCC AATGCACAAC GCCTGCAACA GGCACTGGCC GACTGGCACC AACTCAGCGC TGAGCAGGTA CTGGTCACCA ATGGTGCAAC GGAAGCTTTC TACCTGGTAG CCCACGCATT TCGCAGAAAA TCAGTTACTA TCGCTATACC AGCCTTCGCA GAATATGAAG ATGCCTGTCA GGCGAATGAC CTCAGCATCA GTTATATCCC TTACGATGAA CTACATCCCG CTACCCGCTT CACGTCAGAT CTCGTATTCT TTGGTAATCC GAATAATCCT ACCGGCGCAG TATTACACCC TGAAACGATC CGGGAATTGC TGGGTGCACA CCCGCAGACG ATATTCGTGA TTGATGAAGC CTATGTAGAT TTTACGGAAG CAATCATCTC TATGGTGGGC GCTATCGATC AGTTGCCCAA TCTTATTATT ATAAAATCAC TCACCAAGAC ATATTCCATC CCGGGTTTAC GACTGGGTTA TATCCTCAGT AACGCGACTA TCATTCAACA GATACTCGCG TCTAAAATGC CCTGGTCTGT CAATGCCCTG GCCATTGAAG CCGGACTCTA TATCGCACAG CACAGGGATG CATTGGCATT GCCTATCGCG GACCTGCGGA AAGACACGCT GGACCTGATG GCTGCGGTGA AGCATATTGA AGGTATACAG GTCAGGGATA CCCAGACCAA TTTCTTTCTT TCGCGGACAA ACACCGGTAC TGCGGCTGAC CTTAAACGAT ACTTACTGGA AAATGAAGGT TTGCTGATAA GGGATGCGGC CAATTTCAAA AGCCTTAGTC CACAACATTT CAGGGTCGCC ACACAAAGAC CGGAAGAAAA TCAGCTACTT ATAAAAGGTA TTCAGGCATG GATCAGCAGT ATCTCTTAA
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Protein sequence | MINGHGDDRY LFNYPVKADF SSNVYYEGLA GGLRQHLTDC LYKLNNYPEA NAQRLQQALA DWHQLSAEQV LVTNGATEAF YLVAHAFRRK SVTIAIPAFA EYEDACQAND LSISYIPYDE LHPATRFTSD LVFFGNPNNP TGAVLHPETI RELLGAHPQT IFVIDEAYVD FTEAIISMVG AIDQLPNLII IKSLTKTYSI PGLRLGYILS NATIIQQILA SKMPWSVNAL AIEAGLYIAQ HRDALALPIA DLRKDTLDLM AAVKHIEGIQ VRDTQTNFFL SRTNTGTAAD LKRYLLENEG LLIRDAANFK SLSPQHFRVA TQRPEENQLL IKGIQAWISS IS
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