Gene Cpin_4423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4423 
Symbol 
ID8360596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5520594 
End bp5521637 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content48% 
IMG OID644966580 
ProductCheB methylesterase 
Protein accessionYP_003124068 
Protein GI256423415 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.87316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATA GAAAGATTGT TGTAATCGGG GCCTCTGCAG GAGGCTTTGA AGCAATAAAA 
AAAATAGTCA GTGATTTACC TGCAAACTTT GATGCAGCTA TATTTATTGT ATGGCATATG
GCAGCCGAGG TGAGAGGTAT ATTGCCGGAG GTGTTAAATA AACTGGGCAC ACTACCCGTA
GCACATGCTG TTGATGAAGA ATCTGTCATA GGCAGACGTA TCTACATCGC TCCGCCTGAC
CGGCATCTGC TTTTGGGGAA AGGAAAAGTA AGGGTAACAC GTGGTCCGAA AGAGAACCGT
TTTCGTCCGG CTATTGATCC CCTGTTCCGG TCAGCAGCTA TAGCCTATGG AACGCAGGTG
ATCGGTGTGG TGCTTTCAGG AGCGCTCGAT GACGGCACCG CTGGTATATG GGCTGTAAAG
CAACAAGGAG GATTGGCGAT AGTGCAGGAC CCGGATGATG CAGAGGTCTC CTCCATGCCG
GTAAATGCAA TGAACGCTGT CAAGGTCGAT CACATAGCGC CGGTCAGTGA AATAGCCGCA
TTGCTCGTCA GGCTTGCCAA TGAGGAAATT CCGTCGCTTA ATGGGCGAAA CGCCGAATTT
GTAACAACCG CGCAGCAGGA GGTGGGCATT GCGATGAAAG ACGAAAATAT CAGCAGGGAA
GTCTTCCGGC ATGGCGAACT TACACCATAT ACCTGTCCCG AATGCCATGG AGTACTGAGC
TCCCTCACAG AAGGAGATCG CATACGTTTT CGTTGTCATA CCGGACACGC TTTTTCAGCA
GATACGCTAT TGTCCGCCAT TACGGAGAGT ATTGAGGAAG CCCTCTGGAA TGCCATTCGC
AATATACAGG AAAGTACGCT GTTACTAAAT CACATGGGCG ATCATTTTGC GGAGGCTAAT
CAGGCTAAAA TAGCAGCAAT GTATTTTAAA AAAGCAAAGG ATGCAATGAA ACGTGGAGAG
ATGGTAAGAA AAGCTGTTTT CGATCACGAG CAATTAAGCA TGGATAGTGT GAAAGACCAG
GCAGATACAG AGAATGTGGC TTAG
 
Protein sequence
MNNRKIVVIG ASAGGFEAIK KIVSDLPANF DAAIFIVWHM AAEVRGILPE VLNKLGTLPV 
AHAVDEESVI GRRIYIAPPD RHLLLGKGKV RVTRGPKENR FRPAIDPLFR SAAIAYGTQV
IGVVLSGALD DGTAGIWAVK QQGGLAIVQD PDDAEVSSMP VNAMNAVKVD HIAPVSEIAA
LLVRLANEEI PSLNGRNAEF VTTAQQEVGI AMKDENISRE VFRHGELTPY TCPECHGVLS
SLTEGDRIRF RCHTGHAFSA DTLLSAITES IEEALWNAIR NIQESTLLLN HMGDHFAEAN
QAKIAAMYFK KAKDAMKRGE MVRKAVFDHE QLSMDSVKDQ ADTENVA