Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4405 |
Symbol | |
ID | 8360578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5488074 |
End bp | 5489489 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644966564 |
Product | HHIPL1; HHIP-like 1 |
Protein accession | YP_003124052 |
Protein GI | 256423399 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0608136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCA ATTCCACTAA AGCCAACTGC ATGCTGCGCC GTATGACCGG CCCTATTTCA GTTGCCCTGT TTACTGTACT GTTTGCATTT CCAGGATGTA AAAAAGATGA CGACAAACCA CCTAAAGCTG TAGACACAAA AGTAATTGCT GAAAACCTCG TGTCCCCTCT TGGTCTGGTA GAGGCGCCAG ACCGTAGTCA CCGTTTATTC ATTCATGACC AGGCAGGCAA AATATGGATT GTGGATGAAG ACGGTACCCA ACTTTCCACC CCCTTCCTGG ATGTGACTGG TAAAATGGTT GGTCTGAATC CAGGTTACGA TGAACGCGGT CTGCTGGGAT TTGCTTTTCA TCCCAATTTC CGCAACAACC GCAAGTTCTA CATTTATTAC ACCTTGCCAC CACGTCCAGG GGGCCCCAGC GGAGGCGGTA CATGGAATAA CCTGAGCCGT ATTTCTGAAT TCACTGCTTC TGCTGCCGAT CCCAATGTAG CCGATCCGGG CACCGAAAAA GTGATCCTGG AACTGGATGA TCCGCAAAGT AATCATAATG GCGGCGCTAT CGGTTTTGGA GAAGATGGTT ACCTCTACAT TGCCATCGGA GATGGCGGCG CGGCAAATGA TGTGGCACCC GGCCATGTGG AAGACTGGTA TGCGACTAAC CAGGGAGGTA ACGGACAGGA TATCGAAGCC AACCTCTTTG GTAATATCCT GCGGGTAGAC GTTAATAGCG GCAATCCTTA TAGTATTCCT GCGAGTAATC CTTTTGTGGG CAAACCGGGA AAGGATGAAA TCTGGGCCTA TGGTTTCCGT AATCCTTACC GTTTCTCATT TGATATGGGT GGTTCCCACT GGCTGTATGT CGGTGATGCC GGACAATCTC TTTATGAAGA AATAGACGTG GTAACCCGGG GAGGTAATTA CGGATGGAAT GTAAAAGAAG GCACCCATTG TTTTGATGCG GCACATAATA CGGTGGAGTT ACCGGGCTGT CCTGTACAGG ATACGATGGG CAAACAACTG ATAGATCCGG TGATTGAGAT GAACAACGCC AGTAATCCTA AGGGAGGTAA AGCAACGACG ATTATCGGGG GAAATGTGTA CCGTGGGAAT GATCTTCCGC AACTGAGGGG TAAGTACATC TTTGGTATTT TCTCACAACC GGGTGGGACA CCCAATGGAG AATTGTATAT GAGTAGTCCG GCGGGTAGCG GTTTATGGTC TTTTGAAGAA CTGATCCTTA AAGACCGGCC AAATGATATC GGCTATTACC TGAAAGGCTT CGGGCAGGAT CTGGATGGAG AAGTATATCT GACTGTCTCC GGTGTTGCTG GTCCTACGGG TAATACCGGT AAGGTACTCA AGCTCATACC AGAAAAGAAA GACAATAGTG GACCCGGCCA TGGCGGTAAA TGGTAG
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Protein sequence | MKINSTKANC MLRRMTGPIS VALFTVLFAF PGCKKDDDKP PKAVDTKVIA ENLVSPLGLV EAPDRSHRLF IHDQAGKIWI VDEDGTQLST PFLDVTGKMV GLNPGYDERG LLGFAFHPNF RNNRKFYIYY TLPPRPGGPS GGGTWNNLSR ISEFTASAAD PNVADPGTEK VILELDDPQS NHNGGAIGFG EDGYLYIAIG DGGAANDVAP GHVEDWYATN QGGNGQDIEA NLFGNILRVD VNSGNPYSIP ASNPFVGKPG KDEIWAYGFR NPYRFSFDMG GSHWLYVGDA GQSLYEEIDV VTRGGNYGWN VKEGTHCFDA AHNTVELPGC PVQDTMGKQL IDPVIEMNNA SNPKGGKATT IIGGNVYRGN DLPQLRGKYI FGIFSQPGGT PNGELYMSSP AGSGLWSFEE LILKDRPNDI GYYLKGFGQD LDGEVYLTVS GVAGPTGNTG KVLKLIPEKK DNSGPGHGGK W
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