| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4368 |
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| Symbol | |
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| ID | 8360541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5432088 |
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| End bp | 5434490 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966528 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003124016 |
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| Protein GI | 256423363 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.129517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA ACTATCTCAA AACCGCTTTC CGCAGTCTTT GGCGCAACAA GCGCTATGCA
TTACTTAACA TTACCGGTCT TACGTTGGGT ATCACCGTTT GTCTTGTGAT CTATGTGATC
ATTCAATACG AGCAGAGTTT TGATACGTTT CATACAAAGA AAGACCGGAT CTATAGGGTG
CTGACAGTAT CACCAGGGGA AAATGGCAAT ACCAATTATA CACAGGCTGT ACCATTTCCC
ATACCCACTG TGCTGCCCAA TGACTTTGCA GAATTTGAGA AGGTGACTGG TATTGTACAA
ATGGGTAAAA GACTGGTCAC ACTGGAAGAC AGTAAAGGCA ATATTCAACA TAAGTTCAAA
CCACTGGTAT ATTTCTTACA GCCTTCGTTC TTTGACATAT TTGATTATAA ATGGTTGGCC
GGCAACAAGG CCACCGCGTT AAATGATCCC AGTGCAACCG TTTTGTCACG GTCTACTGCG
GAGAAGTATT TCGGCGACTG GCATAAGGCT ATGGGAAAGG TTATCCGGCT TGACCAGCAG
TTTAATCTGA CAGTCACAGG TATACTGGAT GATCCTCCTG AAAACACAGA GTTTCAGTTT
GATATGGTGG CAACTTATGC CATGATGAAA ATAAATGAGA TAAAGGATTG GGTAACGATA
GACGATATTC ATAGTTGTTA TGTATTGCTG CGCCCGGGAC AGGATGTGGC AAAGATTGAC
CGGCACCTGA TTGCTTTTTC GAAGAAATAT AAAGACCCGA AAAACACGGC TACACACATG
TTACAGCCTT TGGCTGGCGT GCATACAGAT AAACGTACGG GAAACTATAT CGGTCGCGTG
GTACCACCGG AACGCATCAG GATGTTGTGG ATGATTGCCG CATTTATCCT GCTGATTGCC
TGTGTGAACT TCATCAATCT GGCTACCGCA CAAGCGGTAA ATCGTGCACG TGAGATTGGG
GTCCGCAAGG TACTCGGCAG TAACCGCTGG CAGCTGCAAA CACAGTTTCT GTCTGAAACC
GCCATACTGG TGCTGCTTTC TTTGCAGCTG GCAATGATAT TAGCGTTATG TCTGTTACCG
TTCATCAGCA GTGTCATGAG TCTGCCCCTG GGAGCAGGTA TGCTGACAAG CGGGAATGTA
TATCTGTTGC TGTTCGCTAT CTTCCTGGTC GTTACTTTGC TGGCAGGTTT CTATCCTTCT
ATTGTAGTAG CTGCTTTTAA TCCGATTAAT GCACTAAAGA GCAGGATCGC CGCCGGCAGA
AAGTCAGGAG GTATTTCTTT GCGCCGGGGA CTGGTGGTTT TCCAGTTTAT TATTACACAG
GCGCTGATCA TCGGTACACT CATCATCTTG CAACAAATGA ATTACTTTCA CAGTCAATCC
ATGGGTTTTA CCCGGGAGGC CATTGTGAAT GTACCTTTCC GTAATGACAG TGCGGGCAAT
GCCAAGATTT CGTATCTCCG GGGTCAGCTG GAACATATCA GAGGCATACA GGAGGTAAGC
TTTTCGGATG CAGCGCCTTC CAGTGATGGT AACTGGTGGA CCGGCTTTAA ATTTGATCAT
CAGACGGAAG ATGTCAAATT TGCTTCGGTG ACACGTTGGG TAGATTATAA CTTTCTGAAC
ACCTATGATA TTAAACTCGT AGCAGGCCGC AACCTCACCC GCACCGATTC CGTACGTGAG
TTCCTGGTGA ACGAAACCCT GGTACAAAAA CTGGGGCTGA AACCAGCGGA TGTGCTCAAT
AAAAACATGG ATGTATGGGA TGGAAGGATT AAAGGACCTA TTGTAGGCGT AGTCAGGGAC
TTTACTGCCG GTACGCTGAA AGAAGCCATG GCGCCTGTAT TTATGAGCAA CATCAAACGG
CGTTTCAGCA ATGCAGGTAT CCGGCTGGCA GCAGGCGCCG ATGCGCAGGC TTCCATGAAA
GCGATCGAAA AACTCTGGAA TGACAACTTT CCCGAACAGA TCTTCGAATA TCAGTTCCTG
GATCAGAAGG TGGCAGAATA TTACAGGGAA GAGCGCCAGC TGGCACATTT GTATGAGATC
TTTGCAGGTA TCGCCATCTT TCTCAGTTGC CTGGGATTAT ATGGTCTGGC TTCATTCATG
GCAGTACAAC GTATAAAGGA AGTTGGTGTG CGCAAAGTAT TGGGCGCCAC TCCTGCACAT
ATCGTATACC TTTTCTCAAG GGAGTTTATG CTGTTGATAG GTATCGCCTT TGTAATTGCA
GCTCCGCTGG TATGGTACTT TATGCATAAC TGGCTCAATA ATTTTGTGAA CCGGGTAGAT
ATTAACTGGA GCGTGTTTGT AGCCGGAGGT ATGACGGCGC TGCTGATAGC TTTGATTACA
GTGAGTTCGC AAGCTATACG GGCGGCGATG ATGGACCCGG TGAATAGTTT GAAAGCAGAG
TGA
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| Protein sequence | MLKNYLKTAF RSLWRNKRYA LLNITGLTLG ITVCLVIYVI IQYEQSFDTF HTKKDRIYRV
LTVSPGENGN TNYTQAVPFP IPTVLPNDFA EFEKVTGIVQ MGKRLVTLED SKGNIQHKFK
PLVYFLQPSF FDIFDYKWLA GNKATALNDP SATVLSRSTA EKYFGDWHKA MGKVIRLDQQ
FNLTVTGILD DPPENTEFQF DMVATYAMMK INEIKDWVTI DDIHSCYVLL RPGQDVAKID
RHLIAFSKKY KDPKNTATHM LQPLAGVHTD KRTGNYIGRV VPPERIRMLW MIAAFILLIA
CVNFINLATA QAVNRAREIG VRKVLGSNRW QLQTQFLSET AILVLLSLQL AMILALCLLP
FISSVMSLPL GAGMLTSGNV YLLLFAIFLV VTLLAGFYPS IVVAAFNPIN ALKSRIAAGR
KSGGISLRRG LVVFQFIITQ ALIIGTLIIL QQMNYFHSQS MGFTREAIVN VPFRNDSAGN
AKISYLRGQL EHIRGIQEVS FSDAAPSSDG NWWTGFKFDH QTEDVKFASV TRWVDYNFLN
TYDIKLVAGR NLTRTDSVRE FLVNETLVQK LGLKPADVLN KNMDVWDGRI KGPIVGVVRD
FTAGTLKEAM APVFMSNIKR RFSNAGIRLA AGADAQASMK AIEKLWNDNF PEQIFEYQFL
DQKVAEYYRE ERQLAHLYEI FAGIAIFLSC LGLYGLASFM AVQRIKEVGV RKVLGATPAH
IVYLFSREFM LLIGIAFVIA APLVWYFMHN WLNNFVNRVD INWSVFVAGG MTALLIALIT
VSSQAIRAAM MDPVNSLKAE
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