Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4342 |
Symbol | |
ID | 8360515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5400484 |
End bp | 5400762 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644966503 |
Product | RNP-1 like RNA-binding protein |
Protein accession | YP_003123991 |
Protein GI | 256423338 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.621123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00155097 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATATAT ACGTGTCCAA TCTGAGTCCT TTTATTGTTA ACGAGGACCT AAATAATCAT TTTTCCAGAT ACGGAGTGGT GAGTTCAGCA AATGTTATTA TCGATAAATT TACGAATCGC AGCAGAGGAT TTGGCTTTGT CACCATGCCA AATGATACTG AAGCGGAAAA AGCCATCCAG GAAATGAATG GTTCATTAAT AGATGGGAAA ACGATTGCTG CCAGTCAGGC CAGACCCAGG GAAGAGAAAC CTGGCAGGTC CTACAATAAT CGCTGGTGA
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Protein sequence | MDIYVSNLSP FIVNEDLNNH FSRYGVVSSA NVIIDKFTNR SRGFGFVTMP NDTEAEKAIQ EMNGSLIDGK TIAASQARPR EEKPGRSYNN RW
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