Gene Cpin_4242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4242 
Symbol 
ID8360415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5304850 
End bp5306766 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content46% 
IMG OID644966409 
Productputative esterase 
Protein accessionYP_003123897 
Protein GI256423244 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2382] Enterochelin esterase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.630883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.535374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAC TGGTCCTTAC CATTGCAGCT TTTTGTATGG TCTATATAAC CGGACATACT 
CAAGCGATTG TTAACCATGC GCCTCAGGGT TTTGATACAC TGCGTAATAA TATTATCCAC
GGAAAAATTG ACACCATTGT GTACATTTCC AAAACAGTAG GTGTTAAGCG CAGGGCCCTG
GTGTATACGC CGCCTGGCTA TGCTAAAAAA AACAGATATC CTGTGTTGTA CCTACTGCGT
GGTATTGGTG GCGATGAAAA GGAATGGCTG AACGGCGGCA CTCCTCAGGT GATACTGGAT
AACCTGTATG CCGAAGGTAA ATTAGCTCCA ATGATCGTTG TTATGCCAAA TGGACGAGCT
ATGACAGATG ATCGTGCTAC CGGCAATATT ATGGCGCCTG ACAAAATTCA GGCGTTCGCT
ACTTTTGAAC AGGACTTGCT GCAGGACCTT ATTCCTTTTG TTGAAAAACA ATTCCCTGTG
TTTACTGACA GGGAGAACCG TGCTATTTCG GGTTTGTCTA TGGGGGGAGG CCAGGCGCTA
AACTTTGGGC TGGGCAATCC CGATCGGTTT GCCTGGGTTG GCGGCTTTTC TTCCGCTCCT
AATACCCGAA GTCCTGAGTT ACTGGTGCCT GACCCGGAAG TTGCAAAAAG GCGGCTTAAG
CTACTTTGGA TTTCCTGTGG CGATAATGAC AACCTGATTA GCTTTAGTAA GCGTACACAT
GACTATTTAT ATGAAAATAA AGTACCACAT GTTTATTATA TAGAACCAGG CAGGCATGAC
TTCACCGTCT GGAAGAACGA CCTCTACATG TTTTCCCAGT TGCTCTTTAA GCCCGTTGAT
CCGTCTACTT TTACACAGTA TACAGTACTT GGTACGCCTG CGGTCACTAA TGTACGCAAC
GCCAGCTTCC CACAGGTATT GCCCGACAAC CGTGTCGTAT TTCGTCTGAA AGCACCACAG
GCGCAACGGG TACAGATTGA TCTTGGCAAA AAATACGATC TGACAAAGGA TACAGCAGAC
TATTGGACCG GTACGACTGA TTCCATAGGT GAAGGATTCC ATTATTACTC TTTACTAATA
GACGGTGTCG CCGTTGCCGA TCCTGCGAGT GAAACTTTTT ATGGAATGGG GCGTATGGCT
GCTGGTATTG AGATCCCCTT TGCGGATGGC GCTTTTTATG CTATTAAAGA TGTGCCTCAT
GGTGATGTAC GCAGCAAGCG CTACTTCTCG CCAGTCACCA ATTCCTGGCG TCGTTATTTT
GTATACACCC CCCCAGGATA TGATAGTGCC GTTGATCAGC GATATCCTGT ACTCTACCTA
TTGCATGGCG GAGGCGAGGA CGAACGGGGA TGGAGTACAC AGGGCAAGAC CGACCTGATC
CTCGACAATC TCATTGCTAT AAAACAAGCT AAGCCTATGC TTGTGGTGAT GATGGATGGA
AATGTATCTA CGGGCAGCTT TAATGAGCAG TCGTTGCGGA CGTTTGAAAA TGAGCTGTTA
CGCGTTGTTG TACCTTCTGT TGAAAGAAAT TATCGTGCAG TGGCGAATGC TGAACACAGG
GCATTGGCGG GCTTGTCAAT GGGCGGGATA CAAACACTTT ATGCTGGTGT TAATAACACC
GATCAATTTG CTTATCTGGG CGTGTTCAGT TCCGGTTGGT TTGGCGGCAA ACAACCGGTG
GCAGAACAGC AATACGCTTT TATGAAGCAG TCGGCCGGTA AAATCAATAG TAACCTGAAA
CAATTCTGGA TCACTATGGG TGGCAAAGAA GATATCGCCT ATAACAACTG CCAGAATATG
CTGGCCAGGT TTGATGAAAT GCAGATTAAA TATAATTACA GCGAATATCC TGGTGGTCAT
ACCTGGCCGG TATGGCGTAA TAACCTCTAT AAGTTTGCCC AACTGTTATT TAAATAA
 
Protein sequence
MKRLVLTIAA FCMVYITGHT QAIVNHAPQG FDTLRNNIIH GKIDTIVYIS KTVGVKRRAL 
VYTPPGYAKK NRYPVLYLLR GIGGDEKEWL NGGTPQVILD NLYAEGKLAP MIVVMPNGRA
MTDDRATGNI MAPDKIQAFA TFEQDLLQDL IPFVEKQFPV FTDRENRAIS GLSMGGGQAL
NFGLGNPDRF AWVGGFSSAP NTRSPELLVP DPEVAKRRLK LLWISCGDND NLISFSKRTH
DYLYENKVPH VYYIEPGRHD FTVWKNDLYM FSQLLFKPVD PSTFTQYTVL GTPAVTNVRN
ASFPQVLPDN RVVFRLKAPQ AQRVQIDLGK KYDLTKDTAD YWTGTTDSIG EGFHYYSLLI
DGVAVADPAS ETFYGMGRMA AGIEIPFADG AFYAIKDVPH GDVRSKRYFS PVTNSWRRYF
VYTPPGYDSA VDQRYPVLYL LHGGGEDERG WSTQGKTDLI LDNLIAIKQA KPMLVVMMDG
NVSTGSFNEQ SLRTFENELL RVVVPSVERN YRAVANAEHR ALAGLSMGGI QTLYAGVNNT
DQFAYLGVFS SGWFGGKQPV AEQQYAFMKQ SAGKINSNLK QFWITMGGKE DIAYNNCQNM
LARFDEMQIK YNYSEYPGGH TWPVWRNNLY KFAQLLFK