| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4236 |
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| Symbol | |
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| ID | 8360409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5297580 |
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| End bp | 5299895 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644966403 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_003123891 |
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| Protein GI | 256423238 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.931107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAACG CATTATTGGT CATTTTCTTG ATTCTATTTA CAAATTCATC ACTGGCACAA
ACCAGCAATC TGGATGAATT ACCTTTGTCG GAATTAAGGC AAAAACTGGC AAAAAGTGCC
AATGATACGA CTAAGGTCCA GGTGCAACTG GCCCTGGGAC ATTTAATGCT TCAAAAACCT
ACCCAGGACG AGAAAGACAT TGATTCAGCT GTCTCGTTCG CAACACAGGC TGCAGCACTA
AGTCGCCGGC TCGACTATCA TTTTGGAATT ATTAATGCCA TGCTGCTCAG TGCAGAAACT
TATTATAATC GAGGTGATCG CGAAACGGGT CTGACGACTG CTCAAAATGC GCTGACATTC
TCTCAAATGC ATAGCAATAG CGATGGGGAG GGAAGATCAT ATCACCTTAT CGCCCAGTAC
TACTCTATTT CTGATCCGGT CTCCCTTCAA AACAGGATCC TATATATGAG CAAGGCTATC
AGTGTATTTA GAAAAAACGG GAATATTCTT TGGCTCTCCT TTTTGCTAAT GGCAAACGCC
GATCTGTTAT TTAATGCAGA TCGAATTACC GAAGGACTTA GGCTATTGTT CGAAGCCTTA
AATTTAGGAA AAGGAGTAAG TCGCCGAACT GTTGAGGGGA TTTACTGGAA CATCGGGAGG
ATATCGTATG ATTTAGGCGA TTATAGCAAT TCCTTAAAAT ATAATATGTT GGCGATTGAG
ACAGCCAAAG AAGTCAACGA TACAACGTTA CAGGTCAGTT TAATTAACCA TCTTATCGCG
TCTACTTATA TTAAACTGGA GGACTATAAC AAGGCGATTC CATATGCCGT TGATGCATTA
AGGCTGGCAA AGCGTTACAA CGACCGGAGC TTTATGGATG CCGGGTCTTC AATACTGGCA
TTAGCATACA CCCGCACGGG CGAACTCTCT AAAGCTTTAG CACTACTCGA AGAAATGAAA
AACCGGGCTG TTACTAACCC GGAAAAATTA TCGGTAACAG TGGAGCTTTT AAATAATCTG
GTCTATGCAG AACGCTTCGG AGATGCTGAA AAATATGTAC AGGACGTAAC AAGTCTGTTA
AAGGCAATCT CCAGTGAGAA CGTCACAGAA CGCATGAACG CCTATAACTC CCTCGCCGCC
TATTATTCGG AGATAGGACA GGTGAAACAA GCTTACCGCT ATACGGAGCT GTATGCCACC
ATGGCGCACA AACTAAATTA TGCAGCGGGT ATCAGAACGG CCGAATACCG TTATTATAAG
CTGGTGTCAT TACAAGGAGA TACGAAGTCT GCTATGAAGC ACTTTCTTAA AGAAAAGGAG
ATTAAAGATT CAATTGATAA TATCGCCAAA AACTATCAGA TCTCCCTACT TCATATTGAA
AATGAGACAC TGGAAAAAAA CAGGCATATA GACTCGCTTA CCAGGGAAGC ACTGATAAGT
GATATTAAAT TGAAACGTAA CCAACTTCTC CATAAGGTGA CCATTGGCGG AATTGTGTTA
TTACTGATCA TTATTGCACT TATTTATAGC CGTTACAGGT TAAAACAACG CAGCAATGCG
CTTTTGTTGC TTCAGAAATC TGAGATTGAC CAGCAAAATA TTTCTTTACA GCATCTGGTA
TCGGACAAGA ATCAGCTCAT TGGGGAAAAA GACCTGCTAC TCAAAGAAGT GAACCACCGT
GTAAAAAATA ATCTGCAGAT CGTTATGAGC CTGCTGGATA CACAATCAGA ATATGTAAAG
AATGAGAAAG CACAGGAAGC GATACTGGAA AGCCAGAACC GCGTGCATGC GATCGCGTTG
ATACATGATC AATTATATAA GACGGATAAC ACGACGGAGA TCAATCTTTC ATTATATATT
AAAAAATTAG TTCACTCATT GAACAGTTCT TTAAATCACA GCATGAACAA GGTCGCGATA
ACGTGTGAGA TCGATGAGAT CACCCTCGAT GTTTCCCAGG TGGTACCTGT AGGCATCATC
TTAAATGAAA CTGTGACCAA CGCATTGAAA TATGCATTTC CTGATCATCA ACGGGGCCAT
ATCAATGTCC TTGTTAAACA CGTAGGAGCC TTCATAGAGA TAAAAATCAG CGATGACGGT
GTAGGATTGC CCAAAGATTT CAATCCCACA ACTTCAAATA CACTTGGGAT CACACTTTTG
GAAGGATTGA TTAAACAACT GGAAGGGACT TTTTCGATCG AAAATAATCA TGGTTTGACT
ATTTTTTTAA AATTTCCTTT CAAGGTCTAC AATAAACCGA CAATTGTCGA AAGGGAACGG
GAGTTACCGC CCGTGTCAAA ATATGTGGCG AACTAA
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| Protein sequence | MRNALLVIFL ILFTNSSLAQ TSNLDELPLS ELRQKLAKSA NDTTKVQVQL ALGHLMLQKP
TQDEKDIDSA VSFATQAAAL SRRLDYHFGI INAMLLSAET YYNRGDRETG LTTAQNALTF
SQMHSNSDGE GRSYHLIAQY YSISDPVSLQ NRILYMSKAI SVFRKNGNIL WLSFLLMANA
DLLFNADRIT EGLRLLFEAL NLGKGVSRRT VEGIYWNIGR ISYDLGDYSN SLKYNMLAIE
TAKEVNDTTL QVSLINHLIA STYIKLEDYN KAIPYAVDAL RLAKRYNDRS FMDAGSSILA
LAYTRTGELS KALALLEEMK NRAVTNPEKL SVTVELLNNL VYAERFGDAE KYVQDVTSLL
KAISSENVTE RMNAYNSLAA YYSEIGQVKQ AYRYTELYAT MAHKLNYAAG IRTAEYRYYK
LVSLQGDTKS AMKHFLKEKE IKDSIDNIAK NYQISLLHIE NETLEKNRHI DSLTREALIS
DIKLKRNQLL HKVTIGGIVL LLIIIALIYS RYRLKQRSNA LLLLQKSEID QQNISLQHLV
SDKNQLIGEK DLLLKEVNHR VKNNLQIVMS LLDTQSEYVK NEKAQEAILE SQNRVHAIAL
IHDQLYKTDN TTEINLSLYI KKLVHSLNSS LNHSMNKVAI TCEIDEITLD VSQVVPVGII
LNETVTNALK YAFPDHQRGH INVLVKHVGA FIEIKISDDG VGLPKDFNPT TSNTLGITLL
EGLIKQLEGT FSIENNHGLT IFLKFPFKVY NKPTIVERER ELPPVSKYVA N
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