| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4219 |
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| Symbol | |
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| ID | 8360392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5272842 |
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| End bp | 5275184 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644966388 |
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| Product | ATP-dependent endonuclease, OLD family |
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| Protein accession | YP_003123876 |
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| Protein GI | 256423223 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCTAA AAACGATATG CATAAAAAAC TACCGTAGGC TTAAAGACGT TAAAATTAAT
ATACAAAAGG ACACAACAAT TTTTGTAGGA GCCAACAATA GTGGTAAGAC CTCTGCCACT
CATATATTTC AGTCATTTCT CAGTGGAAAG GCTGACTTTT CCTTACATGA CTTCAGCGTC
GATTGCTGGA AACTAATTAA GGATATTTCC CAGTCAACCA ATATTGTCGA AGATATTTAC
AAGCTGCCAA CAATCTCCCT CGATTTATGG TTTGAAGTTA GTGAAGATGA TTTGAACTAT
ATTATTGACC TACTACCCAA TCTGGATTGG GCTTCGCAAC CGGTAGGAAT ACGACTAATG
TATGCGCCGA AAGGACATGA TAACTTACTT TTAGAATACC AGACTGCCAA GGCAGATGCC
CAGAAAAAGG GGAAAGATAT GTTTCAGCCC TGGCCCAAGG ATCTGTCCGA CTACTTAACC
AAAAGACTTA ACCAGGAATA TGAAATCAAT TATTTTGTTT TAGACGCTAC ACAATTTGAT
CGGAACTATA ACATCATTGA TCCCTCCTAC ACTCCCCATG CTCTACATGA AGATAAAGAC
AACAAGAAAA CTGGTGCTGC TATAATCAGA TCTTTGATCA AAGTAGACTT CTTAAACGCC
CAACGTCATC TCTCAGATAA CATATCCACA GGCAGATCGG AGGATCTGTC GAAAAGGTTT
AACCGATTTT ACGATCGCAA CCTAGAAAAA AGAGAAAACG ATCCTGAGAT CTATAAGGCT
TTGTTTGATT CCGAATCACT GCTAACCCAG CATCTGGAAA AGGTATTTCA GCCCACATTA
GATAGCCTAA ATAAATTAGG CTATCCAGGT TTTACTAATC CTAAACTTGT CATCAAAGCC
GCCTATAGTC AGGAATCAGT AAGCCAGTAC GCACAATTGC ATTATTCTAT TGGCGATTTA
GACCTTCCGG ATAAGTATAA TGGACTTGGA TTTAAAAACC TAATCTATAT GGTGATTGAA
ATTCTAGATT TTCATGAGCG ATGGAAAGAA GATACAGATA CTAAAGCACC ATTACATTTG
ATTCTCATAG AAGAGCCAGA AGCACATCTA CATGCACAAC TTCAACAGGT ATTTATCCGG
CAAATTCTAA ATATCATTAA TCCAAGCGGG CAGAATGACG GCTTCAATAC CCAGCTGATC
GTCAGTACCC ACTCTCCGCA TATTATTTAT GAAAGTGGAT TTTTACCGAT AAGATACTTC
AGGCGAACTT CCGAAGTTTC AAAATCTCCA GTGTCTGAGG TATTGAACCT GTCTACCTTT
TACAATGAGA GTGAAAAAGA CTCTCGGGAG TTTCTCGAGA AGTATATGAA ATTGACTCAT
TGCGATTTAT TTTTTGCAGA TGCAGCCATC TTGGTTGAGG GAAATGTGGA AAGATTATTA
TTGCCACTGA TGATCGAAAA ATGCCAAAAA AGCCTGCAAT CCAATTATCT ATCAGTAATT
GAGGTGGGAG GGGCCTTTGC GTATCGATTC GAGCAATTGA TTTCTTTTCT TGGCTTAACC
ACCCTTGTCA TAACAGATCT GGATAGTGTG TTTCCCCCTA AACCACTCCC TCCTAACAAT
GAAACGACAG AAAGCGCAGA TAAGAGCGAG AAAAGTGAAG AAGAGGATAA TGAGGAGGAT
ATTGAAGAAG ATGATTACGA TGATGAGGAG GATAGCGAAG AAGAGGAGCA GAAAGGTAAA
ACGAAAAAAA AGACTGGGGC ATGTTCGTAC AGTACGCCCG ATGCCATCAC GTCAAATTAT
ACTTTACGGC ACTGGTTACC TAAAAAAACA AAAATAGCTG AGATCCTAAC CTGTTCTGAA
CAGGAGCGTA CCCGCATCCA ATCGGCCACC AACCGCGCTT CTGTTCAAGT TTGTTTCCAA
AACAAAGTGG AGATAAATTG GGAAGGTAAA ACTGATACTA ATTGCGGGCG CACATTAGAA
GAAGCATTTG CTTTCGAAAA CCTAGAATGG ACGCAAAAAA TTGAAAATAA ACACCTCAAC
CTAAGAGTCA TTCTAAAGAC AAAGCAACTA ACCGTTAGTG AAATTTCAGC TCGAATAAGC
CGACGAGTAC AGTCATCCAA TTTCGAAAAA ACAAATTTTG CATTGGGTCT ATTAATGGCA
AATGCGGACG AATGGAACGT TCCAGTTTAT ATTAAAGATG GCTTATATTG GCTAGATAAA
ATGTTAAATC CACCCCACCC ATTCAATACC CTACCTGAAT ACGTCAATAT TCATGAGGAT
ACTATACTAC AGCCAACATT CCCTGCTGAG GAAGGAGAAA AAGAACCCAA TACTTTTGAA
TGA
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| Protein sequence | MYLKTICIKN YRRLKDVKIN IQKDTTIFVG ANNSGKTSAT HIFQSFLSGK ADFSLHDFSV
DCWKLIKDIS QSTNIVEDIY KLPTISLDLW FEVSEDDLNY IIDLLPNLDW ASQPVGIRLM
YAPKGHDNLL LEYQTAKADA QKKGKDMFQP WPKDLSDYLT KRLNQEYEIN YFVLDATQFD
RNYNIIDPSY TPHALHEDKD NKKTGAAIIR SLIKVDFLNA QRHLSDNIST GRSEDLSKRF
NRFYDRNLEK RENDPEIYKA LFDSESLLTQ HLEKVFQPTL DSLNKLGYPG FTNPKLVIKA
AYSQESVSQY AQLHYSIGDL DLPDKYNGLG FKNLIYMVIE ILDFHERWKE DTDTKAPLHL
ILIEEPEAHL HAQLQQVFIR QILNIINPSG QNDGFNTQLI VSTHSPHIIY ESGFLPIRYF
RRTSEVSKSP VSEVLNLSTF YNESEKDSRE FLEKYMKLTH CDLFFADAAI LVEGNVERLL
LPLMIEKCQK SLQSNYLSVI EVGGAFAYRF EQLISFLGLT TLVITDLDSV FPPKPLPPNN
ETTESADKSE KSEEEDNEED IEEDDYDDEE DSEEEEQKGK TKKKTGACSY STPDAITSNY
TLRHWLPKKT KIAEILTCSE QERTRIQSAT NRASVQVCFQ NKVEINWEGK TDTNCGRTLE
EAFAFENLEW TQKIENKHLN LRVILKTKQL TVSEISARIS RRVQSSNFEK TNFALGLLMA
NADEWNVPVY IKDGLYWLDK MLNPPHPFNT LPEYVNIHED TILQPTFPAE EGEKEPNTFE
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