| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4197 |
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| Symbol | |
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| ID | 8360370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5246614 |
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| End bp | 5249805 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966366 |
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| Product | peptidase domain protein |
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| Protein accession | YP_003123855 |
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| Protein GI | 256423202 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000751128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.547659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAC TTCTACTCCT CGCAACTGCA CTACTGTGCA GTACACTGTC GTTTGCACAG
GACTACTGGA GGCCACACAC CGACGGCGCC AGAATTAGTA CCGATAAAGC TGTAGCCCGT
CTTGCTTTCC CTACTGAGTT TAAACTGTTT GATCTCAATT TCACCCCTTT CAGAGATCAG
GCTTTCAGAT CGGTCGGTAA TAAGTCCGCA CATGCTACCA TTATTTCTTT ACCCAATGCC
GACGGACAGA TTGAACAATT CGAAATTACA GAAGCATCCA ATTTCGAACC TGCTTTACAA
GCCCGGTTCC CGGATATCAG AGCCTTTTCG GGAAAGGGTA TTACCGACAA ATATGCCACG
TTAAAACTGA GCATATCTCC CGAAGGTATA CAGACGACTG TATTCCGTAC CGGGAAAGAA
AATGAATTTA TTGAGCCGTA TTCTGCTGAC CATACAGTAT ATACTGTATT CAAGAAAAGA
GCGAATACCT TACCTTGGAA ATGTTCCACT CCTGAGCAAC AACTGGCGAC TGACATAGGC
AGCCGCATAC CTGATGTTGC AGGCCGGTCC ACCGGTGATG CCAAGACATT ACGGCTGGCA
CAATCGGTAA CCGCTGAGTA CTCCAATTAC TTTGGCGCTA CCAGCGCTTC ACAGGTAGCC
TTAGTACTGG CCGCTGTAAA CGCTACGCTG ACCCGTTGTA ACGGGGTGTA TGAGAAGGAT
CTTGCGATCC ATCTTAACCT GGTGGCTTCC ACTACCAGTG TATTCTATTA TAATGCTTCC
ACAGATCCGT ATTCTTCTGC CAGTTCAGGA GCCGGTGGCG CCTGGAACGG TGAATTACAG
AGTACCCTGA ACTCCGTAAT CGGTGCTGCC AACTACGATA TCGGTCACCT GTTTGGTGCA
TCCGGTGGTG GCGGTAACGC TGGTTGTATC GGTTGTATCT GTGTTGATAA TTCAAAAGGA
AGTGGATTCA CCTCTCCTGC TGATGCGATT CCACAGGGCG ATAATTTCGA TATCGACTAT
GTGGTACACG AAGTAGGTCA CCAGTTAGGC GCTAACCACA CTTTTTCTAT GAGCAATGAA
GGTACAGGTG TGAACGTTGA ACCTGGTTCA GGTATCACGA TCATGGGGTA TGCCGGTATC
ACCAGTCAGG ATCTGGCGCC GCATTCTATT GATATTTTCC ATGCGGCTTC CATTGCACAG
ATCCAGGCAA ACCTGGCAAC TAAGAGTTGT CCTGTAACAA CCGTTATATC TGGCAATAAC
GCTACGCCAG TAGTAAGTGC CGGTGGTAAT TTTACCATTC CTATCAGCAC GCCGTTTGTC
CTGACTGGTT CCGCTACTGA CGCTAATCCA TCTGATGTAC TGACATATGC CTGGGAACAA
TTTGACAATG CCTCTTCTTC ACAAACAGGC TCCAGCAGTG TGGCCAGTCC GACCAAAGCT
ACTGGTCCGA ACTGGATCTC ATTGCCGCCA GTTACCTCAC CTACCAGGTA CTTCCCTAAA
CTGGCGACCG TCCTCGCCGG TAACTTAGTC TCTGGTCCTT TAACCGGTGG TGATGCAGGC
GCGAATACAG AGGCATTAAG TGCTGTGTCC AGGACCCTGC GTTTCCGTTT AACAGTAAGA
GATAATGCCC CTTATAGTTC TACCGCGCCG GTGACTATCG GACAGACCAA CTTCTCGGAT
ATGACGGTTA CTGTCAGCAA TACCTCCGGA CCATTCTCCG TAACGGCTCC TAATACGGCT
GTTTCCTGGG CGGGTAATTC TTCCCAGAAT ATCACCTGGA ATGTGGCCAA TACAACCGCT
TCTCCCGTAA GTTGTGCGAA TGTTAAGATC TCCATTTCTA CTGACGGAGG TAATACATTC
AGCACCTTAG TTAGCAGTAC ACCGAATGAT GGTAGTCAGT CGGTTATCAT TCCTAACACA
CCAACAACGA CAGCCAGAAT AAAAGTCGAA TCTGTAGGAA ATATCTTCTT TGACATTTCC
AATACCAACT TCACGATTGT ATCCGGATCA TCCTGTACTT CTCCGACAGG ACTGAGCGAT
TCAGCGATTA CCGCTACTTC TGCTACGATC ACCTGGGCAG ATGTAAGTGG AGCAGTATCG
TATGACGTTG ATTACAAAGC AGTCGCAGAT ACTACCTGGA TCAGTGCTGC CGCAGGCATT
ACTGTTACAG GCGTTAACCT GACAGGTCTG CTGGCAGGAC ATACATATGA TTACAGAGTA
AGGTCACATT GTGCGAGCGA TAGTAGTTCT TATGCTGTCG GACAGCTCAC AACTACGCCA
AGTGCATCCT GTAGCGCACC TGGTGGTTTA AGCAGTACAT CGGTAACTAC GACTGCTGCT
GTTATCAGCT GGACGGCTGT AAGCGGTGCA TTGAGTTATG ATGTTGATTA TAAACCAGCT
GCAAGTGCTA CCTGGATCAA TGTCCAGGCT GGAGCGACAG CAACATTTGC GAACCTGACT
GGATTAACCG CTACCACTAC ATACGACTGG AGAGTGAGGA CAAACTGCTC CGATGGTAAT
GGCGCTTATG CGAGTGCACA GTTCACTACC CAAACACCGC CAACCTGTGC TAATAACAAG
GATACTGCTA CCAATGGTAA TACTGCCGGT GCAGCTACTA TTCCATTCAA TACGGATATT
ACGGGTCTTA TCAGTCCGTC TGGTGACATC GATCATTATA AGTTTGTGAT CACCACTGCA
GGTACGATCA CTATCACCCT GGGTACCTTA CCAGGCGACT ATGACCTGAA ACTGCTGAAC
AGTGCCGGTA CACAGCTGGC CATTTCACAG GCGGGTGGTA CGAGCAGTGA AACGATCAGC
AGAAATATGA CGCCAGGTAC TTATTATGCA CAGGTATATG GTTACAATGG CGCTAACAGT
ACTACATCTT GTTATACATT GCGCGTACAG TTAGGTACTG CCAGCCGTAG CACGGATGTA
AGCAGCGGAG ATCTCCCTAA AGTAGCGGTA TTCCCGAACC CTGCTAATAA CGTAGTGAAC
GTTAATCTGA CAGGCTTCAA AGGAAAATCT GCCGTAACGA TGTATGATGT CAATGGTCGT
GTGGTATTAC GCCGTGAAAT GAATCCGGTG AATACGCAGC TGGACATTTC CACATTACCG
ACAGGTGTTT ATATTCTGAA GATCAGGAAC GGTGCGAAAG AGGTGAATAT GACGAAGATC
ATCAAGCAAT AA
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| Protein sequence | MRKLLLLATA LLCSTLSFAQ DYWRPHTDGA RISTDKAVAR LAFPTEFKLF DLNFTPFRDQ
AFRSVGNKSA HATIISLPNA DGQIEQFEIT EASNFEPALQ ARFPDIRAFS GKGITDKYAT
LKLSISPEGI QTTVFRTGKE NEFIEPYSAD HTVYTVFKKR ANTLPWKCST PEQQLATDIG
SRIPDVAGRS TGDAKTLRLA QSVTAEYSNY FGATSASQVA LVLAAVNATL TRCNGVYEKD
LAIHLNLVAS TTSVFYYNAS TDPYSSASSG AGGAWNGELQ STLNSVIGAA NYDIGHLFGA
SGGGGNAGCI GCICVDNSKG SGFTSPADAI PQGDNFDIDY VVHEVGHQLG ANHTFSMSNE
GTGVNVEPGS GITIMGYAGI TSQDLAPHSI DIFHAASIAQ IQANLATKSC PVTTVISGNN
ATPVVSAGGN FTIPISTPFV LTGSATDANP SDVLTYAWEQ FDNASSSQTG SSSVASPTKA
TGPNWISLPP VTSPTRYFPK LATVLAGNLV SGPLTGGDAG ANTEALSAVS RTLRFRLTVR
DNAPYSSTAP VTIGQTNFSD MTVTVSNTSG PFSVTAPNTA VSWAGNSSQN ITWNVANTTA
SPVSCANVKI SISTDGGNTF STLVSSTPND GSQSVIIPNT PTTTARIKVE SVGNIFFDIS
NTNFTIVSGS SCTSPTGLSD SAITATSATI TWADVSGAVS YDVDYKAVAD TTWISAAAGI
TVTGVNLTGL LAGHTYDYRV RSHCASDSSS YAVGQLTTTP SASCSAPGGL SSTSVTTTAA
VISWTAVSGA LSYDVDYKPA ASATWINVQA GATATFANLT GLTATTTYDW RVRTNCSDGN
GAYASAQFTT QTPPTCANNK DTATNGNTAG AATIPFNTDI TGLISPSGDI DHYKFVITTA
GTITITLGTL PGDYDLKLLN SAGTQLAISQ AGGTSSETIS RNMTPGTYYA QVYGYNGANS
TTSCYTLRVQ LGTASRSTDV SSGDLPKVAV FPNPANNVVN VNLTGFKGKS AVTMYDVNGR
VVLRREMNPV NTQLDISTLP TGVYILKIRN GAKEVNMTKI IKQ
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