| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4180 |
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| Symbol | |
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| ID | 8360353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5224982 |
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| End bp | 5226523 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966349 |
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| Product | parallel beta-helix repeat protein protein |
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| Protein accession | YP_003123838 |
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| Protein GI | 256423185 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.23585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0401044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATG CCATCGCATG CCTGTTATTG GCGACCCTGA TTGCCTGTAC TAAGAAAGAA
GACAAATTAC AGGAACAAAC GACTGATGCC CATCCCGAAC TGGTCATCAC CAATTACTAT
GTCAACGGTA CTTCGGGTAA TGACGCCAAT GCCGGTACAA CTGCCACGAC TGCCCTGAAA
ACCATTCAGG CAGCACTCAA CAAGACCACC GAAGGAGCAG GCAGCACCAT TTATGTAGCG
GGTGGTACCT ATAAGGAACG GCTTAACTGG CCGCATTCCG GCGCTTCTGC GGCTGAACCC
ATTACGCTGA CCAACTACAG CGGAGGTACA GTAATACTGG ATGGCGTAGG CGCCACCAAT
AATGCGCAGA ATGCCATGAT TAATGTCAGT AGTAAAAGCT ATCTGAGGAT CAACAACATC
CGTATTGCCA ACAACATCAG GAGTTTTGCC TCCGGAATCT ATATCAGCGG CGCTGGTACG
GATGTACAGA TTACTTCCTG CCGTATTTAT AATATCGGCT GGACAAGCGA CTCTACAGCG
GTTCCTTCTT CTGCGAATAA TGCGAATCCA CTGGTGATAG TCGGTACTAC ACAAACCGCC
TACTCACAGA TCTATGTGGG CAGTAACCAG ATATACGCCT GCAACACCGG TTATAGCGAA
GGACTGACCA TGTCCGGTAA CGTCAACAAC TTCCTGATTG AGAACAACAT CGTACACCAT
ATCAAAAACA TCGGTATAGA TATGACCGGG CATTATAGCT GGACGGGTGC ACCGGATAGT
GTGAACTTTG CCCGTAATGG GAATGTGAAA AATAATGTGG TGTACAACTG TGTATCTCCG
GTGGCTACCA GTGGTGGTAT TTATGTAGAT GGTGGTAAGT GGATCAACAT CGAAGGAAAT
ACCAGTTTTA ACAACGGCGC AGGTATTACT GTGGGTTGTG AGAATGCAAA CAATACAGCG
GAAGGTATCA ATATCCGCAG CAACTTTATT TACAATAATA AAGAAGCAGG TCTTGTAATT
GGTTCGAATG CAGCAGGTAG TAAAGTAGCC TGGTCTTCAG CTACTAACAA CACCTTGTTT
AAGAATTACA CCAACGGCGG GTGGGGAGGA GAGATCAGTC TCCAGCATAC AGATCATATC
ACCCTCTCTA ATAATGTCGT ACAGTCAGCC AGCAACATTG TGGTGATTGC CCTGTTGGGA
TATACCAGCA CCAATCTCGC CATGAACTAT AATAAATATT ATACGGCTTC CGGTACGGCC
AATACCATCA CGTTTGACTG GGGTGGTATC AATGGTACAA GTTATGGTTC GCTGGCCACC
TTCAAGAGTG GTACCGGACT GGATGCCAAC AGTACTTATG GTATCCCGAC TTTTATCAAC
AGTACGCTGG CTACACTGAA CCTGCATCTG GCAAGTGGGT CGGCCTGTAT TAACGCCGGT
GATCCTGCTT TTGTGCCTGC ATCCGGCGAA CTGGATATCG ACAAGCAGTC GCGTAAGCAG
AATAACAGGG TGGATATAGG CGCAGACGAA ACAGCATTAT GA
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| Protein sequence | MKNAIACLLL ATLIACTKKE DKLQEQTTDA HPELVITNYY VNGTSGNDAN AGTTATTALK
TIQAALNKTT EGAGSTIYVA GGTYKERLNW PHSGASAAEP ITLTNYSGGT VILDGVGATN
NAQNAMINVS SKSYLRINNI RIANNIRSFA SGIYISGAGT DVQITSCRIY NIGWTSDSTA
VPSSANNANP LVIVGTTQTA YSQIYVGSNQ IYACNTGYSE GLTMSGNVNN FLIENNIVHH
IKNIGIDMTG HYSWTGAPDS VNFARNGNVK NNVVYNCVSP VATSGGIYVD GGKWINIEGN
TSFNNGAGIT VGCENANNTA EGINIRSNFI YNNKEAGLVI GSNAAGSKVA WSSATNNTLF
KNYTNGGWGG EISLQHTDHI TLSNNVVQSA SNIVVIALLG YTSTNLAMNY NKYYTASGTA
NTITFDWGGI NGTSYGSLAT FKSGTGLDAN STYGIPTFIN STLATLNLHL ASGSACINAG
DPAFVPASGE LDIDKQSRKQ NNRVDIGADE TAL
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