Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4159 |
Symbol | |
ID | 8360332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5187876 |
End bp | 5190929 |
Gene Length | 3054 bp |
Protein Length | 1017 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644966329 |
Product | histidine kinase |
Protein accession | YP_003123818 |
Protein GI | 256423165 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0934723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.139569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAG CTTACCTATT ACTGGTAACG ATCATCATGT TAACCCAAAC CATTAGAGCA CAACAAGAGA CGCCTTATTT CAATACGCTA AGGACTGAAA ACGGGCTTTC CCACAATAAA GTTAACTGCA TCCTGCAGGA CAAAAGGGGA TTTATATGGT TTGGCACAGA GGACGGACTG AATAGATACG ACGGTAAATA TTTTACCATA TTCAGAAAGA CTCCCGGCGA TACGACCTGC ATATCGGGTA ATATCATCAG CGACCTGCTT GAAGACGAGA ATGGCATTAT CTGGATTGCA ACAGAAGATG GCGGCCTGAG TGCATACGAC TACCGCCAGT CCCCCGATAA GCAATTCAGG CAATACCGCT ATACGGACGG CAGTGAAAAA AGTATTCCGG ATAATCATGT GAATGCGATC GTGGATGATC AGCACGGTTA TCTGTGGGTG GGTACCGGTA ACTATCGTAC CAGAAGATTT AATAAAAAGA CAGGCGAGTT TTCACATCCG GTGAAAACTG GCACCACGGC TATTCTGTCA CTCAGCATGG ACGCAAATGA CAGTGTATGG GTAGGTCGTG CAGGCGGCGG ATTGTTAAAG ATCAATGCAC GTACGTTGAA GTACTCGGCA GACAGGCGCT ATGATGATCT TTACGCAAAA CTGTCACACG TATCCGTTAC AGCGTTATTC CGCGACCACA ATAACGATAT GTGGTATGGC GCCTGGGATA AAGTCCTGTA TCACTATGAC CACGTCCGCG ACAGGGAAGA AAGTTTCAGC TACACGCCGG GTAAAAACTC TTTCCCGAAT GATGAAGTCA ATGCCTTTGC AGAAGATAAA GCGAATCGCC TCTGGATGGG CGGAAAGGAC TCCGGTCTGA TAGTCTATGA TCCTGCACAG CATCATTTCT CCCATTACCG GCATCAGCCT TTTGCAGATG GTTCGATCGT CAATGACCAT ATCAATGACG TCTATATCGA CAGGAATAAT ATTGTCTGGG TAGCTACGAA TAACGGCATC AGTTATCATA ATCCCCTCTA CTACCCTTTT AAACAGGTCT TCCTGCCGGG AACGGGTAAA GACATAAGCA TCTATGATTT TTACAAGGAT GCCGGTGGCA GGTTATGGAT AGGTACCAAT GACGGGATTT TTATCAAACC GCCCGGAAAA CAGCCCTTTG AGCACCGGCA GTTAAGCTGG AAAGGACAAC CTTTAAGTGT GACCAAGTTT TTCCAGGATA GCGACGGCAC TTTTTATATC GGCACTGATT ACACGCTTTT CATATATGAT ACGCTGAAAC AGACACTGTC TACCCTGCCT AATACGGAAG GAGATCCGGT GATGAAAAAG CTGATCTCTT CCAGGATTGT ATCTATTGTC AAAGACACCA TGGATACGCA CCCTGTACTC ATTGTCTCTC CTTATGGTCA TTACCTGAGC TATTACGATT TTAAAGAGCA GCATTGGGTG ACGCGTAGCG ACTCTGTACA TGCAATATTA AAAAGATATA ATATCAAGGA TAACCTGATC CGTAAAATGT ACAAGGCAGC CAGTGGTAAT ATCTGGCTCG CCACTACCCG GCATGGCCTG GGCGACTGGC CACAGAAGGA CGGACAGCAG ATAAAGTACC TCAAAGGTAT CAGCAATGAT GATGTATATG ATATCATGGA AGGACAGGCC GGTAATATCT GGATCAGTAC TTATGGCGGC GGACTGAATT ACCTAGATGT GCATACCCAG AAGGCACAGC ATATCCCTGA ATCAAGTAAT CTGACGGAAG GACTGCAAAC TGACAAAGAT GGCAATGTGT GGATGGTCTG CAACGGGCAT ATACACAAAT ATGACCCCGC TGCAAAGATC TATAGCTGTT ACGAACCGCC GACGCTGAAA AAGGACGGAG GAGTTAATGG TTATATGTAC CAGGATGAGC AGGGGAATAT CTATGTAGGC GGTACGAATT ATTACCTCAG TTTTCAGCCT GAGAAGATCT CCCTGATTAA TACGGAGCCT GTTGTCTACC TGACCGACTT TAAGATCTTC AATAATTCCT ACAGCGGTCT GCTGCAAAAA CAGACCATTG AACTGGACTA TAAACAAAAC TATTTCTCCA TTGAGTTTTC TGCCCCGGAA TTCAGCGGCG ATAATATACA ATACTCCTAC ATGCTGGCTG GTGTAGATAA GACCTGGAAC AACGTAGGGA AACGGAATTT TGCTTATTAC TCTAATCTGA AAGGAGGCGA ATATACCTTC CTGGTCAAAG CGAGCAACTG GAAAGGCGTA TTCGGTAACA GGGTAACAGC GCTGCATATT ACCATCATCC CTCCTTTCTG GACCCGCTGG TGGTTTTACC TGGTATGCAC ACTGGTCATT GCGGCTGCTA TTTACCTGCT GTACCGTTAC CGGATCAATG AACTGCTGAA AAGACATGCC ATCAGGAATG GTATTGCCCA GGATCTGCAT GACAGTGTGG GCTCTACATT AAGTGGTATC TCCGTCTATA GTGAGGTAGC TAAAATCTAT AATGATCAGC AAAAGACAGA ACAGCTGAAA GAGCTGCTGA ACACGATCGG CCATACGGCC AATGAAATGA TCTCGGAAAT GTCGGATATC GTCTGGGCGA TTAATCCAAA GAATGACCAT GTCAGCAGTA TCGTGAAACG CATGGAATCT TACGCAAAAC CATTATGTAC CGCGAAAAAG ATACAGTTCA TCTTTAGCTG CGACCAGAAA ATAGAAGACC TGAACCTGGC CATGAACCAG CGTAAGAACT TCTACCTGAT ATTCAAGGAA GCGGTCAACA ATGCGTTGAA ACATGCAGCC TGCAGCTTTA TCAAAGTTAA TATCAGCTAC CGTAAAAACA TGCTGGAGCT GGATATTGAA GATGACGGTA TAGGATTTGA TCATGATGCG GTGAAAAGTC CGGAAGTACT GACACTGTCT GGTAATGGAC TTAGTAATAT CCGGCACCGG GCCAGCGAAA TGAATGCGGA CCTGGGCATA GAAAGTGAAC CATTAAAAGG GACATATTTA AAATTAAGCT TTCCGGTTAC CTGA
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Protein sequence | MRKAYLLLVT IIMLTQTIRA QQETPYFNTL RTENGLSHNK VNCILQDKRG FIWFGTEDGL NRYDGKYFTI FRKTPGDTTC ISGNIISDLL EDENGIIWIA TEDGGLSAYD YRQSPDKQFR QYRYTDGSEK SIPDNHVNAI VDDQHGYLWV GTGNYRTRRF NKKTGEFSHP VKTGTTAILS LSMDANDSVW VGRAGGGLLK INARTLKYSA DRRYDDLYAK LSHVSVTALF RDHNNDMWYG AWDKVLYHYD HVRDREESFS YTPGKNSFPN DEVNAFAEDK ANRLWMGGKD SGLIVYDPAQ HHFSHYRHQP FADGSIVNDH INDVYIDRNN IVWVATNNGI SYHNPLYYPF KQVFLPGTGK DISIYDFYKD AGGRLWIGTN DGIFIKPPGK QPFEHRQLSW KGQPLSVTKF FQDSDGTFYI GTDYTLFIYD TLKQTLSTLP NTEGDPVMKK LISSRIVSIV KDTMDTHPVL IVSPYGHYLS YYDFKEQHWV TRSDSVHAIL KRYNIKDNLI RKMYKAASGN IWLATTRHGL GDWPQKDGQQ IKYLKGISND DVYDIMEGQA GNIWISTYGG GLNYLDVHTQ KAQHIPESSN LTEGLQTDKD GNVWMVCNGH IHKYDPAAKI YSCYEPPTLK KDGGVNGYMY QDEQGNIYVG GTNYYLSFQP EKISLINTEP VVYLTDFKIF NNSYSGLLQK QTIELDYKQN YFSIEFSAPE FSGDNIQYSY MLAGVDKTWN NVGKRNFAYY SNLKGGEYTF LVKASNWKGV FGNRVTALHI TIIPPFWTRW WFYLVCTLVI AAAIYLLYRY RINELLKRHA IRNGIAQDLH DSVGSTLSGI SVYSEVAKIY NDQQKTEQLK ELLNTIGHTA NEMISEMSDI VWAINPKNDH VSSIVKRMES YAKPLCTAKK IQFIFSCDQK IEDLNLAMNQ RKNFYLIFKE AVNNALKHAA CSFIKVNISY RKNMLELDIE DDGIGFDHDA VKSPEVLTLS GNGLSNIRHR ASEMNADLGI ESEPLKGTYL KLSFPVT
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