| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4149 |
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| Symbol | |
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| ID | 8360322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5175865 |
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| End bp | 5177637 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966320 |
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| Product | glycoside hydrolase family 5 |
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| Protein accession | YP_003123809 |
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| Protein GI | 256423156 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.533031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.39445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAT TTAAAAGCGT CACGTTATTA TTACTATCAT CCATTTCCCT CAAACCATTA
CAGGGATGGA GCCAGGGATT TCTTGCAGCC CAGGGCGCCA AAATTGTAAA TGAAAAGGGA
GAAAATGTAC TGTTGCGGGG TATCGGTATG GGAGGCTGGA TGCTTCAGGA AGGGTATATG
CTCCGGGTAA ATGGTGAAGG CCAGCAATAT AAGATCCGCG CTGGCATTGA AAAGCTGATT
GGTCCGGAGA AAACACAGGA GTTCTACGAC GCCTGGCTGA ACAATCACAC GACGAAAGCG
GACATTGATT CTCTGAAAGC CTGGGGATTT AATTCCGTTC GTTTACCCAT GCACTTTAAT
CTGTATACCC TGCCGGTTGA CAAAGAGCCT GTCGCCGGAC AAAACACCTG GCTGGAAAAG
GGATTTACGA TGACGGACAG CCTGCTGTCC TGGTGTAAGG CCAATCATAT GTACCTGATC
CTGGATCTGC ACGCAGCGCC AGGCGGACAG GGGAATGACC TGAATATCTC CGACAGGGAT
GGTTCCAAAC CTTCTTTATG GGAAAGTGAG CCTGACCGTC TGAAGACCAT TGCGCTCTGG
AAAAAACTGG CCGAACGTTA CCATAATGAA CCTTATATCG GTGCATACGA TATCCTGAAT
GAGCCTAATT ATGGCTTTGA AGATCCGGAC AGTGACAAAA ACGGTCTGAA GGAGCAAAAC
AACGTTCCTC TGAAAAAACT TATGCAGGAT ATTACCCGCG CTATCCGGGA AGTAGATGAC
CGCCATATCA TCATTATTGA GGGAAATGGC TGGGGAAACA ATTACAACGG CATCCTGCCG
CCATGGGATA AGAACATGGT GCTGAGTTTT CATAAATACT GGAATCTGAA CGACACGAAA
TCTATACAGC ATATCCTTGA CTTCCGCCAG AAATACAATG TGCCGGTATG GTTGGGTGAA
ACCGGTGAAA ACTCTAATGT ATGGTTCACA GAAGCGATCC GTTTATTTGA AAAGAACAAT
ATAGGCTGGT CCTGGTGGCC GCTGAAGAAA CTAGGCGCTA ATAACCCACT GGAGATCATG
CCAAATGACA ACTACATGCG CGTAATAGAC TATGTTAGCG GTAAAGGCAG CGCACCGTCT
GCAGATGTAG CCTACGAAGG ACTGATGGAA GTAGCCAGAG GTGCAAATAT CAACCGGAAC
ATCCTGCACC GTGATGTGAT TGATGCGATG ATCCGCCAGC CGTTCAGTGA TAAAACGCTT
CCATTTAAAG CCAATAATAT CAATAACAAA GGCGAAATCA AAGCGGTAGA TTATGATCTG
GGTGCATTAC GGGCAGCTTA TTTTGATACA GATACGGCTA ACTATCGCAT TTCCAACCCG
AAATGGACTG GCGGCAATCG CGGCAGAACA TATCGTAACG ACGGTATTGA CATCGTTGCT
GATTCGACAG AAAAGGATAC TTATTATGTA ACGGATATTG TGACCGGTGA GTGGATGAAG
TATACGGTGA CTGTACTGCT GAAAGGCAGA TATAATATTT CATTTGTGGC GGCTCCTGGT
AAAACTCCGG GTAAACTGGC GCTGAGTATT GACGGTAAAC CTATTGGAAA AGTAACGGTT
ATTCCGGCGA AAGAGAACAC CAATGGCGCA TGGCAGACCT ATACCCTCAA TAACATTCCG
TTAAAGAATG GCCGCCAAAC CCTCCGCTTA TCCGCCGAAT CGGGAGGATT TGACCTGAAG
GCCATCCGTT TTGAGAAGTC CCCTGTCCCG TAA
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| Protein sequence | MKLFKSVTLL LLSSISLKPL QGWSQGFLAA QGAKIVNEKG ENVLLRGIGM GGWMLQEGYM
LRVNGEGQQY KIRAGIEKLI GPEKTQEFYD AWLNNHTTKA DIDSLKAWGF NSVRLPMHFN
LYTLPVDKEP VAGQNTWLEK GFTMTDSLLS WCKANHMYLI LDLHAAPGGQ GNDLNISDRD
GSKPSLWESE PDRLKTIALW KKLAERYHNE PYIGAYDILN EPNYGFEDPD SDKNGLKEQN
NVPLKKLMQD ITRAIREVDD RHIIIIEGNG WGNNYNGILP PWDKNMVLSF HKYWNLNDTK
SIQHILDFRQ KYNVPVWLGE TGENSNVWFT EAIRLFEKNN IGWSWWPLKK LGANNPLEIM
PNDNYMRVID YVSGKGSAPS ADVAYEGLME VARGANINRN ILHRDVIDAM IRQPFSDKTL
PFKANNINNK GEIKAVDYDL GALRAAYFDT DTANYRISNP KWTGGNRGRT YRNDGIDIVA
DSTEKDTYYV TDIVTGEWMK YTVTVLLKGR YNISFVAAPG KTPGKLALSI DGKPIGKVTV
IPAKENTNGA WQTYTLNNIP LKNGRQTLRL SAESGGFDLK AIRFEKSPVP
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