Gene Cpin_4134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4134 
Symbol 
ID8360307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5153813 
End bp5154178 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content47% 
IMG OID644966305 
Productputative transcriptional regulator, ModE family 
Protein accessionYP_003123794 
Protein GI256423141 
COG category[R] General function prediction only 
COG ID[COG2005] N-terminal domain of molybdenum-binding protein 
TIGRFAM ID[TIGR00637] ModE molybdate transport repressor domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0113407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGG CAATCAAAGA CATCCTCTCA AACGGCGTAT TAAAAGTGAA TGGCAGCTTA 
TGGCTGGAAG GAAACGGTAA CCGTTTCTTG GGTCCCGGCC CCGTACAGTT ACTGGAACTG
ATACAGGAAA CCGGCTCCAT GAACCAGGCA GCCAAACGCA TGAAGATGTC TTATAAGAAA
GCCTGGGAAC TCATTAATAA TCTGAATAGT ATGGCAGGTA CGCCACTGGT CGTTACCAGT
ACCGGCGGTG ATAATGGCGG CGGTTCTGCT ATCTCTGAAG AAGCCCTTCA GCTCATTGCT
TACCATCGTG AATTAAGAGT CCGGTTCGCC AAATTTCTTG AAGAAGAGAC ACAACGCTTA
AAATAA
 
Protein sequence
MEKAIKDILS NGVLKVNGSL WLEGNGNRFL GPGPVQLLEL IQETGSMNQA AKRMKMSYKK 
AWELINNLNS MAGTPLVVTS TGGDNGGGSA ISEEALQLIA YHRELRVRFA KFLEEETQRL
K