| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4121 |
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| Symbol | |
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| ID | 8360294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5135227 |
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| End bp | 5137596 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644966292 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003123781 |
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| Protein GI | 256423128 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0606813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGCA ACTATTGTCG TATTTCGCTC CGGCGCCTCT GGAACAGCCG GCGGTCAACT
GTTATCAATG TTATTGGTCT GACCGTAGGC TTATCCTGCG GTATCCTGAT CTTCCTGCTG
GTCGGCTACC TGTTTAGCTT CGACCGCTAC CATCATAAAG CAGACAGGAC TTTCTGGATC
GTTACGGATA TCCGCAGAGA AAATACCCTA CATGCTGACG CTACTCCCCG TCCCTTAGGC
AGGATTTTAA GGGAAGAGTT TACAGCGGTA GAAACCGCTG TGCGTTTAGA AACACTTTTC
GGACAGATTA TATCCCTTCC GGGTAGTACG CGTAAGTTTG AAGAGTCCCG TAATATCTGT
TTTACAGAAT CACAGTTCTT CCAGGTGTTT GACGTGGACT GGAAAACTGG CGATAAAAAC
AAAGCCCTGG ACGCAGCGGA TGGTGTTGTA TTATCAGAAC GATATGCTCT TAAATACTTC
GGAACGACTG ATGTAATCGG TCGTTCTTTA CGTATTAATA ACCAGCACGA TCTGACTGTA
AAGGGCCTGA TCGGAGATCC GCCATCTAAT ACAAGGTTAG GATATGATAT CATGGTGTCT
TATAACCTGG TGCCGCAATT ACAGGGGACT TTAGATGAGA AGCCAGACTG GAACAATACG
CCTTCGCTCT GTTTTGTTAC CATGAAAACA GCACAGTCAA TCGGGCATTT ACAACAGGCA
CTCCAGACGA CCTCCAGGAA ATATTTATCC GCTGAACAAG CTGACTTATT ACATTTCCAG
GCGCTTCCCC TGCAGGAATT GAGCCATAAT ACACAGTATG GCGGCACCGT ACCACGACCC
TTGCTATATG TCCTGACAGT GATCGGTATA CTATTGGTAG CAGCGGCCTG TATGAATTTC
ATCAATATGG CTACTGCGCA GTCTATCAGG CGTTCGAAAG AAACGGGTAT CCGTAAGGCA
ATCGGCAGTA CGAGGTTACA GCTGATTATC GAGTTTCTGA CAGAAACAGC TATGGTGACC
TTGGCAGCCG TTATTATATC TGTTATCATT GTACAATTAT GTCTTCCCTG GTTAAATAAT
GCCTTGTCTG TACTACATGC AGATATGTCT GTTCTTTGGT TATTCCGCCC CCGTTTTCTG
AGCTGGTTTC TGGCTTTGAT AGCTGGTGTT ATATTGCTTT CCGGTTTATA TCCGGCGCTT
GTACTGAGTC GCTTTACACC TATAGCCGTA TTACAGGGGC GTGCAAATGG TATACGGACG
AGAGGCGTTT CTCTGCGAAA AGTATTGGTC ATTACACAAT TCTTTATCAC ACAGTTCTTC
CTCATTGCAG TGATTGTCAT GAGTGCACAG GTGAGGTATA TCCGCCAGAC CAACCTGGGA
TTCAATAAGG CCGCCATCCT TACCGTACCC CTTGCTGGCA GTAGCAGTAA GCAGGAAACC
CTGCGTCAAC TGCTTGAAAA GACACCCGGG GTGGAGCAGG TATCCCTGGC AGCTGAAATT
CCCTCCTCTT TCCGTAACGA CCCTGTTTCT TTCAGCTATG AAAATCGTAA GGCGGGATTC
CCTGTCAATG TGAAAATAGC AGATACAGCT TACGCAGGAT TATTTGGTTT GCAATTACTT
GCAGGCACTA ACTTTCATAA CAATGACACA CTCAATGATG AAGCAATGTT GTCATTAATG
GCGATAAAAC AATTAGGATT AGTATCTCCA CAGGAGGCGA TTGGTAAAAA GATCAATATA
TGGGGAAGAG ATAAACGTAT TGTTGGTGTC GTGGCAGATT TCCATTCACA GGATCTGCAT
CATGCCATGC GCCCCGTCAT CTTATTAAAC CTCCCGTCGG AATACAGTAT CGCTGCAATA
AAAACAGGCA CTGCGGCTAC CATTCCCGGA ATAGAAAAAA CGTGGAGTAC AATCTATCCG
GATCAGGTAT TCAGAATGAA TTTTGTAGAT GATATGCTGG CCCGTTTTTA CCTGACAGAA
AATATATTAC TGGGACTAAT ACAGGTGTTT GCAGTCGTAG CGATATTGCT GGGTTGCCTC
GGATTATACG GACTTACACT GTTTATATCA GCAGCAAGAA ATAAAGAGAT CAGTATCAGG
AAAGTATTCG GTGCTTCTGT TACGGGTATG GTTACCATGC TGACAAAGGA TTTTATCAGC
CTGGTAGTAA TTGGTTTATT GATTGCAACG CCCTTAGCAT ATATGGCGAT GAATAAATGG
CTGGAAGGAT TCGCATATCG GGTTAATATT CAGTGGTGGA TGTTAGGGCT GTCTGCAATG
ATCGTTCTAC TTATCTCGCT ATTGACGGTC GGCTGGGAAT CCATTCGTGC CGCAAGAAAG
AATCCGGTGA AGGTGTTAAA AGCAGAATAA
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| Protein sequence | MLRNYCRISL RRLWNSRRST VINVIGLTVG LSCGILIFLL VGYLFSFDRY HHKADRTFWI
VTDIRRENTL HADATPRPLG RILREEFTAV ETAVRLETLF GQIISLPGST RKFEESRNIC
FTESQFFQVF DVDWKTGDKN KALDAADGVV LSERYALKYF GTTDVIGRSL RINNQHDLTV
KGLIGDPPSN TRLGYDIMVS YNLVPQLQGT LDEKPDWNNT PSLCFVTMKT AQSIGHLQQA
LQTTSRKYLS AEQADLLHFQ ALPLQELSHN TQYGGTVPRP LLYVLTVIGI LLVAAACMNF
INMATAQSIR RSKETGIRKA IGSTRLQLII EFLTETAMVT LAAVIISVII VQLCLPWLNN
ALSVLHADMS VLWLFRPRFL SWFLALIAGV ILLSGLYPAL VLSRFTPIAV LQGRANGIRT
RGVSLRKVLV ITQFFITQFF LIAVIVMSAQ VRYIRQTNLG FNKAAILTVP LAGSSSKQET
LRQLLEKTPG VEQVSLAAEI PSSFRNDPVS FSYENRKAGF PVNVKIADTA YAGLFGLQLL
AGTNFHNNDT LNDEAMLSLM AIKQLGLVSP QEAIGKKINI WGRDKRIVGV VADFHSQDLH
HAMRPVILLN LPSEYSIAAI KTGTAATIPG IEKTWSTIYP DQVFRMNFVD DMLARFYLTE
NILLGLIQVF AVVAILLGCL GLYGLTLFIS AARNKEISIR KVFGASVTGM VTMLTKDFIS
LVVIGLLIAT PLAYMAMNKW LEGFAYRVNI QWWMLGLSAM IVLLISLLTV GWESIRAARK
NPVKVLKAE
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