| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4099 |
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| Symbol | |
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| ID | 8360272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5100777 |
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| End bp | 5102579 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966271 |
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| Product | histidine kinase |
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| Protein accession | YP_003123760 |
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| Protein GI | 256423107 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.056511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000691518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTCTAT TTCAACACAT CTCTACAACT GGCTATGATA GAGTGACCGA TGAAGACCAA
CGACGATCAC TGAAAATTGT AAACACCCTG GCACTTGTAA CTGCGCTGAT GGCAGGTATA
TTTGGCCTTG GCTGTTATGT TATGACATGG GATCTGCAGC TATCAGCACC TGCTCTCATC
GAATCCCTCC TGCTTGCCGC CGTTATTGTT ACAAACCGTT TCGGAAAGTT TAGCTCCGCC
GGACTGGCAC TGATCCTGAT CAACAACCTC AGTATCCAGT ACTACAGCGC TATCATGGGA
CGGGTAACGG AAGTGCATCT CCTTTTTATT TTCCTGGTGG GCCTCTCACT GCTGGTCTTT
GAGAAAGACA GGCGAATGCG TGCGCTTAGT ATAGGATTGA CCATCCTGGC ATTCCTCGTC
GGCGAGATCA ATATGTACAA TGGTTTCATC ACACCTATTG TTACTGCTGA AAAGCGTTCT
CCGGTACAGT TCGTTATAAG GTGGGTGACT ATCCCCAGTA TACTGATACT CGATCTTACG
GTGATCTATT ACTATGTAAG AAACATGGAG CGTCAGCGTA AAAAGGAAAT GCGGCAGGTA
CAGGAAATGC TGCAAACGGT TAAGGAACAC AATCGCGAAC TGGAAATCCT GACTGCGCAA
CTGGCGAAGG CCACAGACGC TAAAACGGTC TTTGTAAGAG AGACCAGTCA TGAGATCCGT
ACACCGTTGA ATGCTATTTT CGGAATTAGT CAGCTCCTGC AGCTAAAAGT AGAACAGGAC
CGCTCTCTCG CTCCCATCCG TCAACTGGCA GATCATCTGT ATGCTGCCAG TTACAACACT
CGTGAGATTA TCAATAATGT ACTGGAATTC TCCCGTATCG AAGCGGGTAA GATCGATACA
CCTCAACTGG AAACATTGAA TGTCCGGGAA TGGCTGGAAG GGATTGTCAA TATGCACCAG
TACGTCGCCA GTGTGAAGAC GGTGCGTATC AGGGCTTCAG TAGCAGACGA TCTTCCGCAG
CTGATCAGTG GCGATAAAAT CCTGCTGAGT AAGACCTTGA ACAACCTGTT ATCCAACGCA
ATCAAATTCA CCGCACAGGA AAGCACGATC ACACTCGATG TATTCAGAGA TGATAATAAA
TGGTGTTTGC AGGTCACAGA TCAGGGGGAA GGCATCCGTG CAGACAGGTT ATCTACCATT
TTCAATGCTT TCGTCACTGA ACGGAACATC TTTCTGGAAG GTACAGGTCT GGGATTGCAT
ATCACCCGTC ACCTCGCTAC ATTAATGGGC GGCGATATTA AAGTGTATAG CGTAATGGGC
AAGGGCACGA CATTCACCGT CAACCTTCCC CTGCAGGTAC CTGCGGAGAC TGCCTGTAAT
AATGATAATG ATAATGATGC AGATGCTGAT CTTTGTAGTC TGACTGATAC CAGTATCCTT
ATCATTGAAG ACGATAAAAT GAGCCAGTTG ATTCTGTCGC GTTTTCTCAG CGGATTGGGA
AGCCGTATTA TCGTAGCTGG TGATGGCATG GAAGGACTCC TGCTGGCAAA AGCTTCGCGT
CCTGATATCA TCATACTGGA TTCTCACATT CCTGGTCTCA GCGGTAAGGA CACGCTCGCG
CAGATCCGTG CGGATGAAAT GTTACAGCAT ATCCCCGTGA TCATTGCCAG TGGCGATGCA
TTTAAGGAAA ACCGCGAGGA ACTGCTGCTG GCGGGCGCAG ATGATTACCT GGTAAAACCA
ATCGAGTTTA AAGCCTTGCA GGCTACGCTC TCCAAATACC TGAGAGCAAA TGCCCACCCC
TGA
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| Protein sequence | MSLFQHISTT GYDRVTDEDQ RRSLKIVNTL ALVTALMAGI FGLGCYVMTW DLQLSAPALI
ESLLLAAVIV TNRFGKFSSA GLALILINNL SIQYYSAIMG RVTEVHLLFI FLVGLSLLVF
EKDRRMRALS IGLTILAFLV GEINMYNGFI TPIVTAEKRS PVQFVIRWVT IPSILILDLT
VIYYYVRNME RQRKKEMRQV QEMLQTVKEH NRELEILTAQ LAKATDAKTV FVRETSHEIR
TPLNAIFGIS QLLQLKVEQD RSLAPIRQLA DHLYAASYNT REIINNVLEF SRIEAGKIDT
PQLETLNVRE WLEGIVNMHQ YVASVKTVRI RASVADDLPQ LISGDKILLS KTLNNLLSNA
IKFTAQESTI TLDVFRDDNK WCLQVTDQGE GIRADRLSTI FNAFVTERNI FLEGTGLGLH
ITRHLATLMG GDIKVYSVMG KGTTFTVNLP LQVPAETACN NDNDNDADAD LCSLTDTSIL
IIEDDKMSQL ILSRFLSGLG SRIIVAGDGM EGLLLAKASR PDIIILDSHI PGLSGKDTLA
QIRADEMLQH IPVIIASGDA FKENREELLL AGADDYLVKP IEFKALQATL SKYLRANAHP
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