Gene Cpin_4098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4098 
Symbol 
ID8360271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5099382 
End bp5100545 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content47% 
IMG OID644966270 
Productcytochrome P450 
Protein accessionYP_003123759 
Protein GI256423106 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.1046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00222438 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTCCAT CTACGTTAAA ATCCCCCCTA TCCTGGCATC AGCAATTACA GGATGAACAA 
GCAGTTTATT TTGATCCGGC ATTCAGGTTT TATTTTGGTG GCCAGGGCGC CTGGCAGGTA
TTCCGTCACA AGGAAGTACA GCGCGTACTG AGTGACCATG AAGTTTTTTC CAATGAATAT
ATGCCCAAGT CAGATGATAA TCTCCTGGGG AGCAATCTCA ACCAGACGGA TCCTCCGCGT
CACCGGCAGT TACGTGCACT GGTGAGTAAG GCATTTGCTC CTGCTGTTAT TGCAAAACTG
GAGGCATGGA TCCATCACGA ATGTAAGGAG CTGCTGCAGA CAGTCCTGGC AAAAGGAGAA
ATGGATTTTG TGAAAGTGTT TTCTATTCCT CTACCCGGTC GTGTTACAGC GCAGTTATTA
GGTGTACCTG ATCAGGACCA TGACCAGGTA AACGCGTGGG TCAATGCCAT TTCCAGTGAT
CCTGCCGTTA TTGGTATGGA TGCTTATTTT CAGGCGCAGC AGGAAATGGG CAGGTTGTTT
ACTGCTTTAC TGGAAGAACG TGCTAAAACG CCTCAATCTG ACCTTATATC GCATCTCTTA
CACGCAGAGA TAGATGGTGA ACGATTAAGT ATGCCGGATA CCCTTGCTTT TTGTATTGCG
TTGTTAATAG CGGGCAATGA AACGACCAAT GGTTTCCTGG CCAATGCCAT GTACACGTTT
GCCACTACGC CGGATGTACA GTCGCATCTC CAGGCACATA TTGAAGACCT GCCTTCGGCT
TTAAATGAAG TATTACGCTA TGCGCCGCCG GTACAGAGTA TGTGCCGTAT TGCAAAGATG
GATGTGGAAC TGGGTGGGCA ACTGATCCGT AAAGGGGATC TGATAAATGC ATGGTTGTCA
GCCGCTAACC GTGATCCGTC CGTATTCCGT AATCCTGATA CCTTTGATAT ACACAGGAAT
AATATAAAAA TGGTCAGCTT TGGTCATGGT GCGCACTATT GCATCGGCGC TATGCTGGCG
AGAATGGAAG CAAAAATCGC TTTTGAAATC ATCTTTTCTG CCATAAAAAA TGTCACCTTG
AAGCCAGGTG TCACGCCTGC AAGGAATCCG AGCACCATCG TGGCAGGGTT TCTGGATCTG
CCGATTGTAT TTGAGCCAAA ATAA
 
Protein sequence
MTPSTLKSPL SWHQQLQDEQ AVYFDPAFRF YFGGQGAWQV FRHKEVQRVL SDHEVFSNEY 
MPKSDDNLLG SNLNQTDPPR HRQLRALVSK AFAPAVIAKL EAWIHHECKE LLQTVLAKGE
MDFVKVFSIP LPGRVTAQLL GVPDQDHDQV NAWVNAISSD PAVIGMDAYF QAQQEMGRLF
TALLEERAKT PQSDLISHLL HAEIDGERLS MPDTLAFCIA LLIAGNETTN GFLANAMYTF
ATTPDVQSHL QAHIEDLPSA LNEVLRYAPP VQSMCRIAKM DVELGGQLIR KGDLINAWLS
AANRDPSVFR NPDTFDIHRN NIKMVSFGHG AHYCIGAMLA RMEAKIAFEI IFSAIKNVTL
KPGVTPARNP STIVAGFLDL PIVFEPK