| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4078 |
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| Symbol | |
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| ID | 8360251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5073583 |
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| End bp | 5074755 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966250 |
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| Product | outer membrane protein/protective antigen OMA87-like protein |
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| Protein accession | YP_003123739 |
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| Protein GI | 256423086 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.47886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.117623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGC AAAGAACAAT TATTTTTACG ACGATATTAC TGGCATTTAG CCAGGGACTG
GCAGCGCAGC AGCAATTGCA GGATACTGTA AAACCGCAAC GGCAGGATAC TGCTGTTATA
CATAAACGCA GTTTCTTTCC TTTGCCTGTA GCAGGATACT CCCCGGAGAA AGGACTGGAA
GTGGGCGCTG CCATGTTATA TTCCTTTTAT ACATCGAAAG ACCCGGTTCT TCGCAACTCA
ACTATTAATC TTGTTCCCAC TGTTACAACA GAGAAACAGT TCAAAATAGA CCTGAAGACA
GATATCTGGA CAGATGCTAA TAACTGGCAC TTTAAGAGTA ACCTCCGGTA TCATGACTTT
CCGATCAATT TCTACGGACT GGGTGATACG ACCCGTAAGG CAGGCGCAAC ATTGCTGGAT
AACAGACGCT ATAAAGTACA GCTGGAAGGC GAGCGACGTA TAGGAGGTCA CTTCTACGCA
GGCATGTCGG TATTGTATCA ACATGATACC TATAGCAGTA AAGAAACCAA AGGTGTTTAT
CCGGGAATGA CACTGATAGA CAAGAATGGC GGCCATGTTA CTTTTATCGG AGCGACGGGT
ATTTATGATA ACCGTGACAA CCAGAACTAT ACAACGAAAG GCAGCTGGGT ACGGCTGAAC
GTAGCATTTG CTCCGGCCTT TCTGAGTAAG CATGCACTGT GGAAATTCGA CGGTCAGGTG
CGTCATTTTG TACCGATCTC ACCGAAGAGT ACTGTTGGTT TCAACGGATT ATTTAACTCT
TTACAGGGAA GTGTTTTGCC ATTTTATCTC TTACCTGAAC TGGGTAATGA CCTGATAATG
CGTGGCTATT ATACTGGCCG TTACAGAGAT CAGAATTATC TCGCAGGACA AGTAGAATAT
CGTTATTTCC TGGATCCTAA GATACCCATC AATATCTGGT TCCTGCATAT GCAACCCAAG
TTTGCACTGG CTGCGTTTGG CGGCTCTGGT GCAGTATTTA ACAACAAGGA CATCGCGATG
TCGCACCTCA AACCAAGCTA CGGAATGGGC GTACGCTGGT TCTACGATGA AGGCGCAAAG
CTGACTGTTC GTATTGACTA CGCATGGGGA GAAAAACGCA CAGGAGAGGA GCGTCAATCC
GGATTATACC TCTCTCTGGC AGAGGCGTTT TAA
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| Protein sequence | MSMQRTIIFT TILLAFSQGL AAQQQLQDTV KPQRQDTAVI HKRSFFPLPV AGYSPEKGLE
VGAAMLYSFY TSKDPVLRNS TINLVPTVTT EKQFKIDLKT DIWTDANNWH FKSNLRYHDF
PINFYGLGDT TRKAGATLLD NRRYKVQLEG ERRIGGHFYA GMSVLYQHDT YSSKETKGVY
PGMTLIDKNG GHVTFIGATG IYDNRDNQNY TTKGSWVRLN VAFAPAFLSK HALWKFDGQV
RHFVPISPKS TVGFNGLFNS LQGSVLPFYL LPELGNDLIM RGYYTGRYRD QNYLAGQVEY
RYFLDPKIPI NIWFLHMQPK FALAAFGGSG AVFNNKDIAM SHLKPSYGMG VRWFYDEGAK
LTVRIDYAWG EKRTGEERQS GLYLSLAEAF
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