| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4067 |
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| Symbol | |
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| ID | 8360240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5056329 |
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| End bp | 5058119 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966239 |
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| Product | ABC transporter related |
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| Protein accession | YP_003123728 |
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| Protein GI | 256423075 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00142757 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.169154 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACG ACAGTACACA ACAAAAGAAG CCTCTCCGTG CAGCAGCGTT AAAACGCACG
TTCAGACTCT ATAAATATGT TAAGCCATAT TGGCCGGCCT TTGGTCTCGG TCTCCTTTTC
CTTTTCATTT CCAGTGCCGC CAACCTGGCT TTTCCCAAAC TGCTTGGGGA ACTGGTTGAT
GCCGCCGGGG GACATCGTGT GACGAATGAT CCACACCGGA TCAACCAGAT CGGATTGTTT
CTGGCAGGTA TTCTGATTGC CCAGGGGATT TTTGGTTACC TCCGTATTAT GTTGTTTGTT
AACGTAACAG AACGCTCCCT GGCATCCTTA CGGCAGCATA TCTATAATCA TATGATCAAA
CTGCCGATGC GCTTTTTCCT GAACAGGCGT GTCGGGGAAT TAGGCAGCAG GATTTCTTCA
GATATCTCCC TGTTACAGGA GACGTTTACT ACTACGGTAG CGGAGTTTAT CCGTCAGCTG
ATTATTATTG TCGGTGGACT GGTACTCTTG CTGCATACCT CCGTACAACT GACCATCCTG
ATGTTGACAA CCCTGCCGGT GATCATGGTG ATCGCTTTTT TCTTTGGACG CTTTGTAAGA
CGTTATTCCA AGCTGGCGCA AAGTCAGGTT GCAGAGGCCA ATACGATCGT TGAAGAAACC
CTCCAGGGGG TATTGAATGT CAAGGCGTTC GCGAATGAAT TCTTTGAGAT GCAGCGCTAC
CATAAAAAGA TCCGGGAAGT AGCGGCTACC GGTATGAAAA CCGGGAAGTT CCGTGGTGCT
TTCGCTGCCA GTATGATTGT AGGGGTATTT GGTGCGATGA TCGGGGTGAT CTGGCGGGGC
GCTTTATTGA TCGCCGAAGG GAAAATGGAT CCGGGTATGC TGTTATCCTT TGTCCTGTAT
TCCAGTTTTA TTGGCGGATC GGTTGCTGGT CTGGCGGAAG TATACGCCAG CATTCAGAAA
AGTATCGGTG CGACGGAACA CCTGCTGGAA ATCCTCGATG AACCCGCGGA ACCGGTGGAA
GAAATGACGA CTGTCGCCCC ACAGGACCAG TTAACAGGAC AAATCTCCTT CAACGATATC
TCTTTCCATT ATCCTACCAG GGAAGACCAG GAGGTATTAC AACATGTTTC TTTTGATATC
GCTCCCGATC AGCAGGTAGC ACTGGTTGGC CCCAGCGGGG CTGGTAAGAG TACAATCGTT
TCCTTACTGT TACGCTTATA TGATCCACAG GAAGGCACTG TGCGGTTTAA TGGGAAAGAC
GCGACCGGTT TTCCGTTATC AGCTCTGCGT AGTCAGATGG CGATCGTGCC ACAGGATGTA
TTTCTCTTTG GAGGAACCAT CAGGGAAAAC ATAGCGTATG GTAAGCCCGG CGCCGGCACG
GAAGAAGTAA AGGCAGCGGC TGAGAAGGCA AATGCCTGGG AGTTTATAGA ACGTTTTCCT
GACGGACTGG ATACGATAGT AGGAGAAAGG GGTATTCAGT TATCCGGCGG ACAACGGCAA
CGTATTGCTA TTGCGCGGGC AGTATTGAAG AATCCAAGGA TACTGATACT TGATGAAGCT
ACTTCCGCTT TGGATTCCGA ATCAGAAAGA CTGGTGCAGG ACGCGCTGGA AAAACTGATG
GAAGGCCGTA CCTCTATTGT CATTGCACAC CGTCTGAGCA CTGTGCGTCA GGCAGATAAG
ATCATTGTGC TGGATAAGGG GCAACTGGTA GAAGAGGGTA CACACGAGGA GCTGGTACAG
ATGGATGGTG GATTATACAG GAATCTGAGT GAGATGCAGT TCTCACATTA G
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| Protein sequence | MQDDSTQQKK PLRAAALKRT FRLYKYVKPY WPAFGLGLLF LFISSAANLA FPKLLGELVD
AAGGHRVTND PHRINQIGLF LAGILIAQGI FGYLRIMLFV NVTERSLASL RQHIYNHMIK
LPMRFFLNRR VGELGSRISS DISLLQETFT TTVAEFIRQL IIIVGGLVLL LHTSVQLTIL
MLTTLPVIMV IAFFFGRFVR RYSKLAQSQV AEANTIVEET LQGVLNVKAF ANEFFEMQRY
HKKIREVAAT GMKTGKFRGA FAASMIVGVF GAMIGVIWRG ALLIAEGKMD PGMLLSFVLY
SSFIGGSVAG LAEVYASIQK SIGATEHLLE ILDEPAEPVE EMTTVAPQDQ LTGQISFNDI
SFHYPTREDQ EVLQHVSFDI APDQQVALVG PSGAGKSTIV SLLLRLYDPQ EGTVRFNGKD
ATGFPLSALR SQMAIVPQDV FLFGGTIREN IAYGKPGAGT EEVKAAAEKA NAWEFIERFP
DGLDTIVGER GIQLSGGQRQ RIAIARAVLK NPRILILDEA TSALDSESER LVQDALEKLM
EGRTSIVIAH RLSTVRQADK IIVLDKGQLV EEGTHEELVQ MDGGLYRNLS EMQFSH
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