| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4063 |
|---|
| Symbol | |
|---|
| ID | 8360236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5053320 |
|---|
| End bp | 5054522 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644966235 |
|---|
| Product | protein of unknown function DUF763 |
|---|
| Protein accession | YP_003123724 |
|---|
| Protein GI | 256423071 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1415] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000157406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0638485 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCATG CCGATCTTCC ATTACATTAC GGTCACGTAC CACCATGGCT GGCTCAAAGA
ATGAGCCTGT TGGGAGGCGC TATAGTCGAA ACCATTGTCG CTGATTACGG AAAAGGAGAA
GTCATTCGCC GCCTGAGTGA TCCCTGCTGG TTTCAGGCAT TGGGTTGTGT TTTGGGGATG
GACTGGCACT CATCAGGTAT CACGACCAGC GTAATGGGCG CATTAAAAAA AGCATTGAAT
CCCAGGGCTC AGGAACTGGG TATCTATATC TGTGGAGGAA AGGGTAAACA CTCCCGTCAG
ACGCCCGCAG AATTACTGGC AATTGCAGAA CGGACCGGAT TACCGGGACA GGAACTGGTA
CGCAGCAGCA AACTGGCAGC TAAAGTAGAT AACACTGCCA TACAAGATGG GTTTCAGTTG
TATCTGCACT CCTTTATTGT CTCAGACGAA GGCGACTGGG CCATCGTACA ACAGGGTATG
AATGACGCAA GCAGTATGGC GCGGCGTTAT CACTGGCATT CAGCAGCTTT CAAAGAATAT
ACGGAGTCTC CGCATACATT TATCTATGGT AAAAATCAGG GACTCATTCT TAATCTTACC
GACAAAGAAG CAGTGTCCAC CAAAGCAGGT ATGCTTGAAC TGGTGAAAGA AAAGCCCGCT
CACCTGTTGC CCGAGATCAG AAATCTGATT ATGCCCTCGC ATCATGATGT GCGCTCAAAA
GATGTGGATC TCAAGCGATT GGGAAGTGTA CTGGCAGTAG CGCATGAACG CCAGCTGCAC
GACTTTGAGT CCTTATTATT GCTGGAAGGA GTTGGTCCGC GTACTTTACA GTCGCTGACG
CTGGTCAGTG AAGTCATTCA CGGTACGCCA TCCCGCTTTA CAGACCCTGC ACGTTTTTCT
TTTGCACATG GTGGAAAGGA CGGTCATCCC TTCCCTGTTC CGGTGAATGT ATACGACGAA
ACAATCAGCG TATTAAGAGA TGCGGTCAAT AAGGCGAAGA TCGGCCAGTC CGACAAACAG
GATGCGATCC GCAAATTATC CGTACTGTCA CAACAGGTGG AAAAGGATTT CATTCCCAAC
GCCCGGCTGG AAGAACTGAT CCAGGAAGAA AGAGACCAGT CCTGGCAATA CGGCGGCCGT
ACCGTGATGG GCAAAGCACA ACCGCCGAAG AAAAAAGGTG GTGATCAGCT CAGCTTATTC
TGA
|
|---|
| Protein sequence | MSHADLPLHY GHVPPWLAQR MSLLGGAIVE TIVADYGKGE VIRRLSDPCW FQALGCVLGM
DWHSSGITTS VMGALKKALN PRAQELGIYI CGGKGKHSRQ TPAELLAIAE RTGLPGQELV
RSSKLAAKVD NTAIQDGFQL YLHSFIVSDE GDWAIVQQGM NDASSMARRY HWHSAAFKEY
TESPHTFIYG KNQGLILNLT DKEAVSTKAG MLELVKEKPA HLLPEIRNLI MPSHHDVRSK
DVDLKRLGSV LAVAHERQLH DFESLLLLEG VGPRTLQSLT LVSEVIHGTP SRFTDPARFS
FAHGGKDGHP FPVPVNVYDE TISVLRDAVN KAKIGQSDKQ DAIRKLSVLS QQVEKDFIPN
ARLEELIQEE RDQSWQYGGR TVMGKAQPPK KKGGDQLSLF
|
|---|
| |