| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4031 |
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| Symbol | |
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| ID | 8360204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5015127 |
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| End bp | 5016359 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644966204 |
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| Product | ornithine aminotransferase |
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| Protein accession | YP_003123693 |
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| Protein GI | 256423040 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR01885] ornithine aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0013504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.512867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACACA CATTTAATAT CAGTGAAAAG ACCCAGCATT TTCTGGACCT GGAAGAACAA
TACGGGGCTC ACAACTACCA TCCATTGCCC GTAGTGCTGG ATCGCGGGGA AGGTGTTTTT
CTCTGGGACG TTGACGGTAA ACGTTATTTC GATTTCCTGT CAGGTTATTC TGCGGTGAAC
CAGGGGCATT GTCACCCGAC AATCATCCGC GCCTTAACCG AACAGGCACA GCGCCTGACA
TTGACCTCCC GTGCTTTTCA CAATGACCTG CTCGGCGAAT ACGCTGCCTT TATCACCCGC
TACTTCGGCT ACGACAAAGT ATTGCCGATG AACACCGGCG TAGAAGCTGT GGAAACAGCG
CTTAAACTGG CCCGCCGCTG GGGCTATGTG GTAAAAGGTA TTCCCGAAAA CCAGGCTAAG
ATCATCGTAT GCGCCAACAA CTTCCATGGC CGTACCCTGA ATGTTATTTC CTTTAGTACA
GATCCTTCTT CCCGGACGAA CTTCGGTCCG TTTATGCCGG GATATGAAGT GATTCCATAT
AATAACCTGG CGGCACTGGA AAGAGCCCTT CAGGACAACA ACGTAGCCGG CTTCCTCGTA
GAGCCGATAC AGGGAGAAGC TGGTGTGATG GTACCCGATG ACGGATACCT CTCCAAAGCC
CGTCAGTACT GTGAAGACGC CAACGTATTG TTTATCGCCG ACGAGATCCA GACCGGCCTT
GCCCGTACGG GAAAGATGCT TTGCTGCGAC CACGAAAACG TACGTCCGGA CATCCTGATA
CTCGGAAAGG CACTCTCCGG AGGTATCTTA CCGGTAGCCG CCGTACTGGC AGATGACGAG
ATCATGCTTA CCATCAAACC GGGTGAACAT GGCAGCACCT ATGGTGGTAA CCCGCTGGCC
TGTAAAGTAG CCATCGTAGC ACTGACTGTA TTGAAAGAAG AGAAAATGAC GGAAAATGCT
GCCGCAATGG GCGAACTGCT CAGAAAGGAA CTGGCCGCGC TCCAATCTCC TCATATCAGC
ACTATCCGTG GAAAGGGGCT GCTCAACGCC ATCGTCATCA ACCACGCTCA TCCGGAAGCA
GCCTGGGACC TTTGTCTGGC ACTGAAAGAA AATGGTTTGC TGGCCAAACC CACCCATGGC
GATAAAATCC GCTTCGCACC GCCATTGCTG ATCACAGCAG CACAGGTGAA AGAAGCTGTC
GCCATCATTG CTAAAAGTCT TGAAATATTA TAG
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| Protein sequence | MLHTFNISEK TQHFLDLEEQ YGAHNYHPLP VVLDRGEGVF LWDVDGKRYF DFLSGYSAVN
QGHCHPTIIR ALTEQAQRLT LTSRAFHNDL LGEYAAFITR YFGYDKVLPM NTGVEAVETA
LKLARRWGYV VKGIPENQAK IIVCANNFHG RTLNVISFST DPSSRTNFGP FMPGYEVIPY
NNLAALERAL QDNNVAGFLV EPIQGEAGVM VPDDGYLSKA RQYCEDANVL FIADEIQTGL
ARTGKMLCCD HENVRPDILI LGKALSGGIL PVAAVLADDE IMLTIKPGEH GSTYGGNPLA
CKVAIVALTV LKEEKMTENA AAMGELLRKE LAALQSPHIS TIRGKGLLNA IVINHAHPEA
AWDLCLALKE NGLLAKPTHG DKIRFAPPLL ITAAQVKEAV AIIAKSLEIL
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