| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4006 |
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| Symbol | |
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| ID | 8360179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4983916 |
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| End bp | 4986126 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966180 |
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| Product | histidine kinase |
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| Protein accession | YP_003123669 |
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| Protein GI | 256423016 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.155316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00128379 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCCGA AGCTGATTAA ATACTACCTG CTGGGCCTGT TCGTAATAGG CCTTGTACTG
TTTATAGTGC TGCAATTCAA CTCAGCTCAG AACATCCGTA AGCTCATTTC CGGCAATGAA
AAACTGCTGG ATGAACTGAA CGTAAAGAAT GAGCTACAGA AACTACAGAC CAATATAGCC
AAAACCGATA GTAAAGTACG GGGTACCGTT ATCTCACAGG ACACCCTCAA TATCACAGGT
ATTGAAGCGG AAGTCGCCGT CATCAAAGCA GATCTCGGCG AAATCAATAA ACTCGTCCTG
AATGACAGTA CCGAAAAACT CCTCACCCAG CTAAACTACC TCGTAGACGA GAAAAATAAT
TTCAATGTAG CCGTACTGGA TAGTTTTTAT CTGAAAGGGA AATGGTCCGC AGAAAGGATG
ATCAACGCCC AGAAAGGGAA ACGCCTCGGC GAAGCCATCA ACGTGATATT ACATGCCCTG
GATAGTACCC GGCAGACAGA AGTGAACCAT ACAACACACC TTATTGACAC CAGCGGACAA
AAAGCATTAA ACTGGGGCAC TATTATGCTC TTTTTTGCCT GTTTATCCAG TCTGCTGTCA
TTTCTCTATA TCACCAGCCG TATTTACAAG CAGGAACAGC TGATAGAAGC ACTCGACCAT
TCGCGGCAGC AGGAAAAGAA GCTCACCGTG GTCAAAGACC AGTTCCTCGC CAATATGAGC
CACGAGATCA GGACGCCCAT GAACGCCGTA TTAGGCTTCA CCCATCTGCT GCAACAGCAA
CCCCTGAATG AAAAATCCAG GGAATATGTG GCCTCCATCC AACATGCAGG CGAAAACCTG
CTGGATATCA TCAACGATAT ACTCGACATC TCTAAAATAG AATCAGGTAT GATGCGCCTG
GAGCCGGTAT CATTTAGTCT CAGGGGAATG ATGCACTCCC TTCAGCTGAT GTTCCAGCCA
AAAGCGCAGG AAAAATTACT GGACCTGAGC GTCCATATAG ACGCAGGCGT ACCCGACATC
CTTTATGGAG ACGTAATGCG CCTGACCCAG GTGCTTGTTA ACCTGGTCAA CAACGCGATT
AAATTCACCC CACAGGGACA GGTGACAGTC AGGGTTTCAC CGGTCGGCGG GAATGAATCC
GGCATACGTT TACTGTTCAC CATAGCAGAT ACCGGTATTG GTATCTCTCC CAACAAACTG
TCTACTATAT TTGACCGCTT CAACCAGGCA GAGGCAGATA TCACCCGTAA ATACGGGGGT
ACCGGTTTAG GACTGACCAT CGTAAAACAA CTTGTAGAAC TACAACACGG TACGATCAGC
GTGGAAAGCG AATTGGGAAA AGGCAGCACC TTCCTGGTAC AACTCCCCTA TACACAGGGT
GAACTGCTGG CCGAAGGGAC TGAACTTTCA GGGTACTCTC AGGAGCATTT TACCTTGCCG
CAACAACCCG ATATACGCTT GCTGGTAGCG GAGGACAACC GCATGAACCA GAACCTGTTG
CGGCATCTGT TGGGTAACAG GCAACTGCAT TATCAGCTGG TCGCTAACGG ACAAGAAGCT
GTCAATGCCC TCTCAAAACA ACATTTCGAC CTGATCCTGA TGGATCTGCA GATGCCTGAA
ATGGACGGTT ACACGGCCAC CAGGAAGATC CGGGAAGAAC TACACTCCAA TATTCCGATC
GTCGCCATGA CCGCACACGC CATGGCCGGA GAAAGAGAGA AATGCCTGCA GACTGGCATG
AATGAATACC TGGCGAAACC GATACGGGAA GAAGAACTCT ACCGGATGAT ACAGGTCTTT
ACCGGCAAAA GCAGTACGCC GGAGCATTAT GTACACCCCC ATCCGCATAA TGGTTATGCA
TACAACGGGG AATCTTCCCT TGTACAACTG GAATATCTGC AACAGCTATC CCGTGGAGAT
AAAGCGTTTG AACAGAATAT GCTGACACAG TTCGTCACAC AGCTACCAGA GGATCTTTCG
ATGCTCAAAA AGGCGATCGA TGAGGAAGCT GCTACAGATA TACGTCGCAC CGCACATACG
CTGAAAACCA CTATTTCCTT TATCGGACTG GAAGCCCATC TGTATCCGAT ACTGGAATCA
TTTGAACACC TGGAAGTTAA CTATGACAAA GCCCTGGTAT CCGACCAGTT CAATACCCTG
AAACGCCTGT GTGTACAGGC TTTACAGGAG ACGCTGCAAT TGCTTTTTTA G
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| Protein sequence | MQPKLIKYYL LGLFVIGLVL FIVLQFNSAQ NIRKLISGNE KLLDELNVKN ELQKLQTNIA
KTDSKVRGTV ISQDTLNITG IEAEVAVIKA DLGEINKLVL NDSTEKLLTQ LNYLVDEKNN
FNVAVLDSFY LKGKWSAERM INAQKGKRLG EAINVILHAL DSTRQTEVNH TTHLIDTSGQ
KALNWGTIML FFACLSSLLS FLYITSRIYK QEQLIEALDH SRQQEKKLTV VKDQFLANMS
HEIRTPMNAV LGFTHLLQQQ PLNEKSREYV ASIQHAGENL LDIINDILDI SKIESGMMRL
EPVSFSLRGM MHSLQLMFQP KAQEKLLDLS VHIDAGVPDI LYGDVMRLTQ VLVNLVNNAI
KFTPQGQVTV RVSPVGGNES GIRLLFTIAD TGIGISPNKL STIFDRFNQA EADITRKYGG
TGLGLTIVKQ LVELQHGTIS VESELGKGST FLVQLPYTQG ELLAEGTELS GYSQEHFTLP
QQPDIRLLVA EDNRMNQNLL RHLLGNRQLH YQLVANGQEA VNALSKQHFD LILMDLQMPE
MDGYTATRKI REELHSNIPI VAMTAHAMAG EREKCLQTGM NEYLAKPIRE EELYRMIQVF
TGKSSTPEHY VHPHPHNGYA YNGESSLVQL EYLQQLSRGD KAFEQNMLTQ FVTQLPEDLS
MLKKAIDEEA ATDIRRTAHT LKTTISFIGL EAHLYPILES FEHLEVNYDK ALVSDQFNTL
KRLCVQALQE TLQLLF
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