Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3951 |
Symbol | |
ID | 8360124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4910480 |
End bp | 4913182 |
Gene Length | 2703 bp |
Protein Length | 900 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644966125 |
Product | Aminopeptidase N-like protein |
Protein accession | YP_003123614 |
Protein GI | 256422961 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.823523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.346171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGTGTCG GACTCCCACC CAAAATGAAA CCCTTTATCC TTTTTTCGGC TTTGTGCTTA AAGCGCTTTT GTTATATTTA TGGCTATTTC CAAATTGAAA CGCTAATGAC AATCAACAAA ATCCTGCTTT GTTCAGGCGT CCTGCTGGCT TCCCTCGGGA ACGTCGCTGT GGGACAGACC GCTACTTCGA AGTACGATCA GCATGAAGTT TTCGGCCCCC TGTTTTACCC TGCCAACGGT AACGAGTATC GCAGTGCATC CGGCGCCCCT GGCCATAAAT ACTGGCAGAA CCGGGCGGAC TATACGATCA ATGTTGTACT GGACACTGCC AGTCACCGCA TAGATGGTTC CGTTGCCATC ACCTACAAAA ACAGCAGCCC GGACAAGTTA CCTTTCGTAT GGCTGCAGAT GGACCAGAAT ATTTATAAGG AAGATTCCAG AGGAGCTGCT ACCAGCGTTG TTACAGGTGG CCGTTTTGCC AACCGTAGTT ATACAGAAGG TTACAAAATC AAGTCTGTAA GCGTTGCTAT CGGCGGAAAG AAAACCGAAG TAAAATACAC TGTTACCGAC ACACGTATGC AGGTGATCCT GCCGGAAGCC CTGAAAGCAG AGGGCGGCGT GGCGAAAATA TACGTGGACT ACGCGTACGA AGTGCCACAG TACGGTACTG ACCGTACCGG CCGTCTGAAA ACGAAATACG GCTGGGTATA TGAGATCGCG CAGTGGTACC CGCGTATGGA AGTGTACGAC GACGTACTGG GCTGGAACTC TATCCCTTAT CAGGGTGCTG CGGAGTTCTA CCTGGAGTAT GGCGACTTCG ATTATACCGT GACAGCGCCT GCCGGTATGG TGGTAGCTGG ATCCGGTGCA CTCGTTAACG AAGCGCAGGT ACTGACCGCA AAACAACAGG CACAGCTGGC GAAGGCGCGT AACAGCGACC AGACCGTAAT GATCAAGGAT AGCGCAGAAG TAGCTGCTGC AAAACCAGGT ACAGGTATGC AGTCCTGGCA TTTCCAGTGC AAAAATGCAC GCGACGTGTC CTGGGCGGCT TCTACCGCGT TCATCTGGGA TGCTGCCCGC ATTAACCTGC CAAGCGGCAA GAAATGCCTG GCGCAGTCCG TATACCCTGT AGAAAGTATC CAGACCAGCA ATGGCTGGCA GCGTTCTACC GAGTACGTAA AAGGCTCCAT TGAGTTCTAT TCGAAACAAT GGTTTGAATA CACCTATCCG GTAGCGACTA ACGTAGCAGG TATCGTAGGT GGTATGGAAT ATCCCGGTAT CGTATTCTGT TCCTACAGGA GCACCGGCGG CGGCTTATGG GGTGTAACCG ATCACGAATT CGGTCACAAC TGGTTCCCGA TGATCGTTGG TTCAAACGAA AGAAAATATG CCTGGATGGA TGAAGGTTTC AACACGTTCA TCAATGATGG TTCCAGCAAA GCATTCAATA ACGGTGAATA CTATCAGAAG CAGCAGGGAC AATCTATGGG CCGTGCGATG AGCGGAGATC CGATCATGAG TACTCCGGAC GTAATCCAGA GCAGCTACCT GGGTATCGCA GCTTACTACA AACCTTCAAT GGGTCTGATG ATCCTGCGTG ATTATATCCT GGGTAAAGAG CGCTTCGAAT ATGCCTTCCG TACCTACATC GATCGTTGGG CATTCAAACA TCCGACACCA TGGGATTTCT TCCGCACGAT GGAAAACGTG GCAGGTGAAG ACCTGAGCTG GTTCTGGAGA GGTTGGTACC TGAATTCCTG GAAATTGGAC CAGGCAGTGA AAGATGTAAA ATACGTGAGC AACGATCCTT CTAAAGGAGC ACTGATCACG GTGGAAAACC TGGAGCAGAT GGCATTACCG GTTATCCTGG CCATCACTGA CAGCAAAGGT AAAACGGACA CCGTAAAACT GCCGGCAGAA GTATGGCAAC GTGGCGGTAC CTGGACCTTC AAATTTGAGT CAGATTCCAA ACTGACCAAA GTAGTGATCG ATCCGGATAA GGCATTCCCT GACGTTGATC CATCCAATAA CGTATGGAGC GGCTCCAGCA AGAAAGCGCC AGCCGGTCTG ACTGCCAATG AAGTACTGAA AAAATACTTA CAGGCGATCG GCGGTACTGA TAAAATCCAG GCGATTAAAG ACCAGACCAT CTCTGCTACC GGATCCGTAC AGGGTACCGA TATCAAGATG ACCAAGAAGA TCAAATCACC TAACAAATAC CTGCTGGACG TATTCATCCC GATGATGAAC GTACACGCCA GCAAACTAAT TATCAACGGC GACAGCATTA CCGCTATCCA GATGGGTACT CCGGTACCTT TGGATGCAGC AGCAAAAGAA CGCGTAAAAG CAAACATGGT GCTGATTCCT GAACTGGACT ACCTGAAAGG TGGCGTTGAT ATGCAACTGT CTCCTGAAAT CGTTACCGAC GATAATGGTA AAGACAACTA CCTGGTAACT GTAAAAGAAG ATGAAACAAC CCGGACTGAA CTGTACTACG ATGTAGCAAC CGGATTGCTT TCAAAAAAGA TCAGTTACAA TGGCGACCAG ATCACCGGTG CTATTGAAAC CAGCGAGTAT AAAGAAGTAG GTGGCGTGAA ATTCCCATTC CTGCTGAAAA ATACCATTAG CGGACAACAA GTTGATTTCA AGGTAGACGA TATTAAAGTG AACAGCGGTC TCACAGATGC TGATTTTAAA TAA
|
Protein sequence | MCVGLPPKMK PFILFSALCL KRFCYIYGYF QIETLMTINK ILLCSGVLLA SLGNVAVGQT ATSKYDQHEV FGPLFYPANG NEYRSASGAP GHKYWQNRAD YTINVVLDTA SHRIDGSVAI TYKNSSPDKL PFVWLQMDQN IYKEDSRGAA TSVVTGGRFA NRSYTEGYKI KSVSVAIGGK KTEVKYTVTD TRMQVILPEA LKAEGGVAKI YVDYAYEVPQ YGTDRTGRLK TKYGWVYEIA QWYPRMEVYD DVLGWNSIPY QGAAEFYLEY GDFDYTVTAP AGMVVAGSGA LVNEAQVLTA KQQAQLAKAR NSDQTVMIKD SAEVAAAKPG TGMQSWHFQC KNARDVSWAA STAFIWDAAR INLPSGKKCL AQSVYPVESI QTSNGWQRST EYVKGSIEFY SKQWFEYTYP VATNVAGIVG GMEYPGIVFC SYRSTGGGLW GVTDHEFGHN WFPMIVGSNE RKYAWMDEGF NTFINDGSSK AFNNGEYYQK QQGQSMGRAM SGDPIMSTPD VIQSSYLGIA AYYKPSMGLM ILRDYILGKE RFEYAFRTYI DRWAFKHPTP WDFFRTMENV AGEDLSWFWR GWYLNSWKLD QAVKDVKYVS NDPSKGALIT VENLEQMALP VILAITDSKG KTDTVKLPAE VWQRGGTWTF KFESDSKLTK VVIDPDKAFP DVDPSNNVWS GSSKKAPAGL TANEVLKKYL QAIGGTDKIQ AIKDQTISAT GSVQGTDIKM TKKIKSPNKY LLDVFIPMMN VHASKLIING DSITAIQMGT PVPLDAAAKE RVKANMVLIP ELDYLKGGVD MQLSPEIVTD DNGKDNYLVT VKEDETTRTE LYYDVATGLL SKKISYNGDQ ITGAIETSEY KEVGGVKFPF LLKNTISGQQ VDFKVDDIKV NSGLTDADFK
|
| |