Gene Cpin_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3908 
Symbol 
ID8360081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4861347 
End bp4861646 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content49% 
IMG OID644966082 
Producthypothetical protein 
Protein accessionYP_003123571 
Protein GI256422918 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.255272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0019745 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCAACGA CCGTATTTAA CAATCTGAAA CAAGCAAGCC CGCCATGGCT CGTAAACCTG 
ACAGCTATTT TTGCTTTGGC GGCACCGTTA CTACCTGAGC TTATTGACAC AATGCCTGGT
ACGGTATCCA ATTTGACAAA GGAATGGCTT CACTGGATTT TGCAATTGTT GGCAGCAGCA
TTCGCTATTG CAACTGCATT AACCAGGGCA AGCACCGCCT TGCAGATAAG AACGTATTCC
GATGCGCCCC CTGATGGACC TGGAGGAACA GATCCTAATA AACCGCGTGG GCCGAAATGA
 
Protein sequence
MATTVFNNLK QASPPWLVNL TAIFALAAPL LPELIDTMPG TVSNLTKEWL HWILQLLAAA 
FAIATALTRA STALQIRTYS DAPPDGPGGT DPNKPRGPK