Gene Cpin_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3796 
Symbol 
ID8359967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4773486 
End bp4774676 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content50% 
IMG OID644965968 
Product4-hydroxybenzoate 3-monooxygenase 
Protein accessionYP_003123459 
Protein GI256422806 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR02360] 4-hydroxybenzoate 3-monooxygenase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0336813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0760844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGC AAGGAAGTAA TAGGATTGAA AAGACCCAGG TGGTCATTAT CGGTGCTGGT 
GTGTCAGGTT TGACACTGGC GACATTTTTA CAAAAATCAG GCGTGGCCTG TGTCATTGTT
GAGAGACGTA ATCGTGCTTA CATAGAGATG CGTCAACGGG CAGGTGTTGT GGAAGCTCGC
GGGGTGCATA TGTTTGAACG CTGGGGACTG GCGGATAAAT TGCTGGGTGG ACCAGTGGCA
CAGACGATCG ATTATCGTGT CAATGGAGTC GGGCGTGTGT TTGAAATAGT GGGAGATGAT
CGTATACAGG GGCGCTTCTG TACACAGCAG ATGCTTGTTA ATAATCTGCT GAAGGAGCTT
ATTGATGGTA TGAGTGGTGA TGTTCGCTTT GAGGTGACAG ATGTGCAGAT TAAGAATGAA
GAGGGTGTGC AGCCGGAGGT GACTTACAGG TATGCGGATA GCGAACATGT ACTCGTTTGC
GATTATATCG TGGGATGTGA TGGAGACAGA GGAGTGAGTC GTGCGTCTAT TCCGGAGGGC
ATATTGACAA AATACAGTCA TGAATTCGGT TACGCCTGGC TGGCTGCGCT GGTGGAGGCA
CCTGTTACCG GACATCCTAT TATGGGTGTC AGCGATCATG GTTGCGTGGC ACAGCTTCCC
CGTGGACCAC ACAGGAGCCG TTACTATTTA CAGTGTGCAT TGAGTGATGG AGCTCAGGAC
TGGCCCGATG ATCGTTTATG GAATGAAATC CGCTTACGGT TGCAGGATGA AACGATTCAA
AATGTAAAGG TGCATGATAA GTTCTTCGTG CCTCTGCGAT CAGTGGTATA TGCGCCTATG
CAATACCGTC ACCTTTATCT CGCCGGGGAT GCCGCACACC TTGTGCCACC TGCCAGTGCC
AAAGGCATGA ATCTGGCGCT TTTTGATGTG GATATACTGG CACAGGGCTT ATTGCAGGCA
TTGCAGCACA ACGATCATAC GGCACTGCTG AATTATTCTG ATACCTGTTT GCCGCACATC
TGGAAGTACC AGGAGTTTGC CGTGTGGATG ACCGATATGA TGCATGATGC CGGAGATCCT
ACGCAGCACG GTACATTTTA TCAGATGATT GCACGTGCCC GCCTCGATAA CCTGTTTAGT
TCGCCGATAG CTGCCCATCA GCACAGTGAA TATCAACGAG GCATGTTGTA A
 
Protein sequence
MEMQGSNRIE KTQVVIIGAG VSGLTLATFL QKSGVACVIV ERRNRAYIEM RQRAGVVEAR 
GVHMFERWGL ADKLLGGPVA QTIDYRVNGV GRVFEIVGDD RIQGRFCTQQ MLVNNLLKEL
IDGMSGDVRF EVTDVQIKNE EGVQPEVTYR YADSEHVLVC DYIVGCDGDR GVSRASIPEG
ILTKYSHEFG YAWLAALVEA PVTGHPIMGV SDHGCVAQLP RGPHRSRYYL QCALSDGAQD
WPDDRLWNEI RLRLQDETIQ NVKVHDKFFV PLRSVVYAPM QYRHLYLAGD AAHLVPPASA
KGMNLALFDV DILAQGLLQA LQHNDHTALL NYSDTCLPHI WKYQEFAVWM TDMMHDAGDP
TQHGTFYQMI ARARLDNLFS SPIAAHQHSE YQRGML