| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3781 |
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| Symbol | |
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| ID | 8359950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4757083 |
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| End bp | 4760247 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644965951 |
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| Product | cytochrome c-type biogenesis protein CcsB |
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| Protein accession | YP_003123444 |
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| Protein GI | 256422791 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000633001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0119892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAGA AAGTCTTTTT TTCGACGAGG ACGATGGGGG TGTTGCTGAT CGTATTTGCT
TTTGCAATGG CATGGGCAAC ATTCATTGAG AATGATTTCG GCACACCGGC AGCAAAGGAG
CTCGTGTATA ATTCCTGGTG GTTTGAATGG GTGATGATTT TGCTGGTGGT TAACTTTTTG
GGCAATATTG TGCGATATAA ACTTTATAGA AGCAATAAGT GGTCTTTGCT CGTTTTTCAT
ATTGCCTTTT TGTTTATGTT CCTGGGAGGG GCGGTTACCC GTTATCTGAG CTTTGAAGGA
ACTATGCATA TTCGCGAAGG GCAGCTGGAG AATAAGGTTA TTTCTGAAGC GACCTTTTTT
AAGACGCAGA TATCCAGGGG GAATCAGACA CAGGAATATC CTTTCACGAA AGCCGCGTTT
CTACCTGCGA ACACACCGGG CGTCTTTAGC TTGTTTCGGC GTCCTTTTAA AGCGACTTAT
GATTTTTACG GTGAGAAAGT CACAATGCGT ATGCTGGATT TTATTCCGAG AGCGCAGGAT
TCTGTAATGG CGGCTGCCGG AGCTTCAATG TTGCTGCACC TGGTCACGAT AGAGGATGGT
AGTCGCAAGA ACATTTATAT ACCAGCAGGG GAAAGCAGGA CTTTGCAGGG CGTGGATGTT
GGATTTGAAA AAGCTGTGCC AGATGGTATA GCGATAAGTA TGAACAGCGG GCGCTTATCC
ATTCAATCAG CACTGGCTGC ACGTTATCGG GTGATGGCTA CGGGACAGAC TGATTCTGTC
AGTATGGTCA ACTGGAAGGA CGCGTTTCAT TTACGCGCCT TGTATAATTT TAGTACAGGA
TTGTTATTGG TCGTGCCGGA AATGCCGCGT AAGGGCAGGA TTGTATATTA TGAAGGGGAT
CTGAAGAAAA ATACAGCTGA TCCGGATCTG ACAGTGATGG AAATTGGTGT CAGGGACGCG
CGTGATACCG TTTCGTTTTA TGGTGGCAGG GGATTTACCG GTTTTCAGAC GAGTGTTGTA
TTGAAGGATA TGAGGATTGA CATGGGATAT GGTTCCCGGT ATTATTATAC GCCGTTTTAT
ATCCACCTTG ATAAATTCAA GCTTGGAAAA TATCCTGGTA GTAATGCACC TTCTTCATTT
TCTTCGGAGG TGACAGTCAA TGATGCTGGT CGTCTGACAC CCTATGATAT TTACATGAAT
CATACGCTGG ATTATGGCGG TTTCCGTTTT TTTCAAAGTA GTTATGATAC TGATGAAAAG
GGGACGATAT TATCCGTCAA TCATGATGTA ACCGGGACGA GTCTGACTTA TATAGGTTAT
GTGCTATTGT TTGCAGGTAT GTTTTTTACG CTGTTCTGGA AGGGGACGCG GTTTCATGTT
TTACGGCAAC AGTTAAGGAG TGCTTCTTCG ATGAAAGTAT TGATCGTATT GGCTGTCGGT
CTGTTATGCG GAGGGGCGGT CTATGCACAG CCGGTACCAG GAAATGTACC CGATAAAGTG
CATGCTGCAG CATTTGGCTA CCTGGCGGTC CAGAATATCG ATGGCAGGAT TGAACCTGTG
AACACGCTGG CATTGGAAAT ACTCAGGAAA CTGTATCGTC ATGACAGCTA TTATGCATTT
GATGCCAACC AGTTTTTATT GGCGGTAACG ACTAACCCGG CAGAATGGTT GAATGTGCCG
CTGATAAAAG TAAATGAACG GGGAGGGAAA GCGCTTTTGA ATCGTACACA GGCAAATGCG
CAGGGATTGA CAACTATTAT GCATCTCCTT ACTGTGGATA CGGCAGGAGA GGCGCATTTT
TTACTGGAAC AGGAGTATAC CAATGCGTTT GCGAGAAGGG CCGCTGATCA GGATAACTAC
GATAAGGAGG TGATTGAGCT GAACGATAAG ATGCAGGTTG TTCAAATGCT GTTGAGCGGG
ACGTATCTGC GAATTTTGCC AATTCGCGGA GATAGTAACA ATACCTGGAC ATCTGTCAGT
CTGGTACAGG CGCCACAGAA CAAAGGCGAG GAATTGGTGA TGACCTATTT TCAGGCCATT
CAACATGCGC GGAGACATGG TAACTGGAAC AAAGCGGACC AGGTGTTAGA ACAGCTTAGA
ATATTGCAGC GTTCGGCGGG GGCAGCAGTC ATGCCTTCGC AGACGAAGCT GGATTGGGAA
GTCAGGTTTA ACTCCTGGAA CCTGTTTTTT AAATTGATGC TGTTATACGC AGTGATTGGA
ACCATACTGT TGTGTGTATC GTTTGCAGCT ATGTTTAAAT GGAGCAAAGT ACTGCGATAT
GTTATCCGGA CTTTGATCGC GTTGTTGGTG GTAGCCGCTT TGTTACAAAC ATGCGGTCTG
GTAGTACGAT GGTATATTTC CGGTCATGCG CCGTGGAGTA ATGGCTATGA AGCGGTGATG
TTTATCAGTC TTATTGGTCT TGTGTCGGGA TTGCTTTTGT ACCGTAATGG TAATTCCTAT
ATTCCTGCTG CGGGCGCCTT GATTGCTGTC ATTTTAATGG GTTTTGCGCA TGGCGGTGCG
CAGATGAATC CGCAGATAAC GCCATTGGTA CCTGTTCTGA AATCCTATTG GCTGATGATT
CATGTGGCTA TCATTACCGC CAGCTATGGG TTCCTGGGAC TCAGCGCATT ATTAGGCATG
TTTGTATTAC TGCTGCATAT TGTCAACAAT CCAGTAAGGA GATACTTTAT AGAAAAGTCG
TTACGGGAAC TTACTATTGT TAATGAGCTG TCGATGATTA TCGGCATATT CATGCTTACC
TGCGGTACCT TTTTAGGTGG GATGTGGGCC AATGAAAGCT GGGGTCGTTA TTGGAGCTGG
GATCCAAAAG AGACCTGGGC CTTTATTTCT GTTATCGTAT ATGCTTTTGT GCTTCACATA
AGGCTTATAC CAGGTATGCA AAGCAAATTC CTGTTCAATT TCCTGTCTGT GGTGTCGTTC
TCTACCGTAA TCATGACATA CTTTGGGGTC AACTACTATC TGTCAGGTTT GCATTCGTAT
GCAAAAGGGG ATCCAATGCC AGTACCTTCC TGGATATACC TATCGTTGGC AACGGTAGCG
TTTGTATCGC TGGCGGCTTT GTTCAGATAT AGACGTTTAG GTCGTGCATT GGGACGCATG
CAGGAAAATA AGTCTGCTAA CATTTCAAAT AAATATTTAC AATAA
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| Protein sequence | MLKKVFFSTR TMGVLLIVFA FAMAWATFIE NDFGTPAAKE LVYNSWWFEW VMILLVVNFL
GNIVRYKLYR SNKWSLLVFH IAFLFMFLGG AVTRYLSFEG TMHIREGQLE NKVISEATFF
KTQISRGNQT QEYPFTKAAF LPANTPGVFS LFRRPFKATY DFYGEKVTMR MLDFIPRAQD
SVMAAAGASM LLHLVTIEDG SRKNIYIPAG ESRTLQGVDV GFEKAVPDGI AISMNSGRLS
IQSALAARYR VMATGQTDSV SMVNWKDAFH LRALYNFSTG LLLVVPEMPR KGRIVYYEGD
LKKNTADPDL TVMEIGVRDA RDTVSFYGGR GFTGFQTSVV LKDMRIDMGY GSRYYYTPFY
IHLDKFKLGK YPGSNAPSSF SSEVTVNDAG RLTPYDIYMN HTLDYGGFRF FQSSYDTDEK
GTILSVNHDV TGTSLTYIGY VLLFAGMFFT LFWKGTRFHV LRQQLRSASS MKVLIVLAVG
LLCGGAVYAQ PVPGNVPDKV HAAAFGYLAV QNIDGRIEPV NTLALEILRK LYRHDSYYAF
DANQFLLAVT TNPAEWLNVP LIKVNERGGK ALLNRTQANA QGLTTIMHLL TVDTAGEAHF
LLEQEYTNAF ARRAADQDNY DKEVIELNDK MQVVQMLLSG TYLRILPIRG DSNNTWTSVS
LVQAPQNKGE ELVMTYFQAI QHARRHGNWN KADQVLEQLR ILQRSAGAAV MPSQTKLDWE
VRFNSWNLFF KLMLLYAVIG TILLCVSFAA MFKWSKVLRY VIRTLIALLV VAALLQTCGL
VVRWYISGHA PWSNGYEAVM FISLIGLVSG LLLYRNGNSY IPAAGALIAV ILMGFAHGGA
QMNPQITPLV PVLKSYWLMI HVAIITASYG FLGLSALLGM FVLLLHIVNN PVRRYFIEKS
LRELTIVNEL SMIIGIFMLT CGTFLGGMWA NESWGRYWSW DPKETWAFIS VIVYAFVLHI
RLIPGMQSKF LFNFLSVVSF STVIMTYFGV NYYLSGLHSY AKGDPMPVPS WIYLSLATVA
FVSLAALFRY RRLGRALGRM QENKSANISN KYLQ
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