Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3705 |
Symbol | |
ID | 8359873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4651683 |
End bp | 4652873 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644965874 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003123368 |
Protein GI | 256422715 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.806401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.251051 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGTGA TCTCACTGAT TTTCTGGTGC AGTATTTTTC TTGTTTGCTA TAGCTATGTA GGCTATGGAC TGTTACTATA TATAGTAATT AAGATACGTC GTTATTTCGT AAAAATCCAA CATATTGGAG ACGATGCACC TTATACCCCG GAAGTAACAT TTATGGTGGC TGCTTATAAT GAAGCCGCAT TTATAAAAGA AAAGATCCTG AATACACTTT CATTGAATTA TCCGGAAGAC AAAATGCAGA TCATCTTTGT GACAGACGGG TCTTCCGATG ATACCAATAA TATAATAAGG AGTTACCCGC GTATTACCCT GCTCTACGAA CCAGAGCGTA AAGGGAAGAC CATGGCGGTT AACCGCGCCA TGAAACACGT AAAGACCCCC TTCGTTGTTT TCTCTGACGC CAACACCTTA TTAAATAACG ATGTAGCACT TTGCCTGATG CGTCATTTTA AAGATGAAAC TACCGGTGCG GTAGCAGGCG AGAAAAAGAT ACTCGTGGCT GACCAGGCAG AAGCCGAAGG CGCCGGAGAA GGAATGTACT GGAAATACGA ATCCCTGCTG AAAAAATGGG ATGCAGAATT GTATAGTGTA ATGGGGGCTG CCGGCGAACT GTTTGCCGTG CGTACCGCTT TATATGAGGA TATTCCGGCG GATACCATCC TGGATGACTT TATGATCTCC TTTGGTATTA ATAAGAAAGG ATACCGGGTG GCTTACGCCC CTGACGCCTA TGCCCAGGAA ACGCCTTCTG CCTCGCTGGA AGATGAATAT AAACGTAAAG TGCGTATTGC AGCCGGCGGT TTTCAGTCCA TGAGCCGTTT AATGGACCTG CTGAATTTCT TCCGTTATCC AAAAATCACC TGGCAATATG TGTCGCACCG GGTATCACGC TGGACGGCCG CTCCCCTATG CCTGTTGTTA GCACTACTTA CTAATATCAT CCTCTGTGTT ACCGGAGCTC CTTTCGTATA TTGGTTGTTT CTTGCAGCAC AAATTGTTTT TTATGGCATG GCTTTAGTAG GATATGTGCT GGCCAAACGG CAGGTAAAAA GTAAATTATT CTATATCCCT TTTTACTTTG TCTTTATGAA TGTAGCTGTG TATCAGGGTT TTGGCCGTTT TCTGAGAAAA AAACAATCTG CCGTATGGGA CCGTTCGCAA CGGCAGCTGA CAGTAGGCTG A
|
Protein sequence | MTVISLIFWC SIFLVCYSYV GYGLLLYIVI KIRRYFVKIQ HIGDDAPYTP EVTFMVAAYN EAAFIKEKIL NTLSLNYPED KMQIIFVTDG SSDDTNNIIR SYPRITLLYE PERKGKTMAV NRAMKHVKTP FVVFSDANTL LNNDVALCLM RHFKDETTGA VAGEKKILVA DQAEAEGAGE GMYWKYESLL KKWDAELYSV MGAAGELFAV RTALYEDIPA DTILDDFMIS FGINKKGYRV AYAPDAYAQE TPSASLEDEY KRKVRIAAGG FQSMSRLMDL LNFFRYPKIT WQYVSHRVSR WTAAPLCLLL ALLTNIILCV TGAPFVYWLF LAAQIVFYGM ALVGYVLAKR QVKSKLFYIP FYFVFMNVAV YQGFGRFLRK KQSAVWDRSQ RQLTVG
|
| |