Gene Cpin_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3649 
Symbol 
ID8359816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4583002 
End bp4583937 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content48% 
IMG OID644965818 
Producttranscriptional regulator, MarR family with acetyltransferase activity 
Protein accessionYP_003123312 
Protein GI256422659 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00196269 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.251982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTGA ATCCAGAAGT GGTGCGGGAG GTTAGTGAAT TCAATAATTA TTACAATAGC 
CTGGCGGAGT TATTAAACAG GCACTTAGCG GACAATAATC TTTCTTTATC AGCACTCCGT
GTACTGATAA AGCTGAGGGA AGAGGAAGAA CAATGCACGG CGGGAAAACT GATTGCCAAT
CTGGGTATTG ACGGCGGTTA CCTGAGTCGT ATACTTAAAT CCTTTGAATC AAATCAGCTT
ATTGCCAAAC GTAAATCCAA CCTGGATGGC CGTACCTGGT ATCTGCAACT GACCACAAAA
GGGTCTAAAT TGCTTGAAAC CCTGGAACAG GGTTCAGCAG AACAGATCGG GAAACTGCTT
GAGCCGGTAC CGGCAGAGCA GCAGCTGGCA TTGGCAGGCG CAATGAAAAC CGTGCGTCAC
ATCCTTTCTG ACGACGCGAA GATCTCTCCG GAAGATATCA CCTACAGACG TGATCTGCAA
CCGGGAGATG CTGGTTTTAT CATGCACATG CACGGGTCGC TTTATGCGAA GGAAGCAGGT
TACAACCTGG AATTCGAAAC GCATACCTGT AAGACCTTCT ATGAGTTCCT GGAAGCCTAC
AATTCTTCCA AGGATCAGGT ATTCCTGGCG ATGCACGGCA ATCAGATCAT CGGTTCTATC
GCGGTACTGG GACATTCCCG TTACGCTACG CAGATGCGCT GGTTCCTGGT TCATCCGGAT
TACCGTGGTA TCGGTATTGG TCAGCGACTG CTGACGGAAG CGATCAATGC GGCTAAAGAG
AAGTTGTTCC AGAAAATCTA TCTCATTACG ACGAGTCAGC AGGTAGCAGC TACCTCCTTG
TTTAAAAAGA ACGGTTTCCG TAAGTCAGGA GAGAAACACA TGCCAATGTG GGGCTTACAG
CTGACGGAAG AACGTTATGA GATTGACCTG ATTTAA
 
Protein sequence
MSVNPEVVRE VSEFNNYYNS LAELLNRHLA DNNLSLSALR VLIKLREEEE QCTAGKLIAN 
LGIDGGYLSR ILKSFESNQL IAKRKSNLDG RTWYLQLTTK GSKLLETLEQ GSAEQIGKLL
EPVPAEQQLA LAGAMKTVRH ILSDDAKISP EDITYRRDLQ PGDAGFIMHM HGSLYAKEAG
YNLEFETHTC KTFYEFLEAY NSSKDQVFLA MHGNQIIGSI AVLGHSRYAT QMRWFLVHPD
YRGIGIGQRL LTEAINAAKE KLFQKIYLIT TSQQVAATSL FKKNGFRKSG EKHMPMWGLQ
LTEERYEIDL I