Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3648 |
Symbol | |
ID | 8359815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4582439 |
End bp | 4582882 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644965817 |
Product | cytochrome c class I |
Protein accession | YP_003123311 |
Protein GI | 256422658 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00073069 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.303937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAAT GGATACTGGC AGCAATGCCA TTGTTAATAG CGGGATTATA CGTGAGCGCG CAGGTGAAGA AACCAGCCAA ATCTGCGGCA AAACCGGTAG CCGCATCTGC AGCAACTATC GCAAGGGGAA AGGCCTTATA CCGGCAGTAC TGTATCTCCT GTCACCAGGA GAATGGCAGC GGCGTACCCC GTATGAACCC ACCGTTGATT AAAACGGAAT ATGTATTGGG CGATAAGCCA AGGCTGATCG GCATCTTACT GAACGGGTTC AACGAAGACG TAGAGATTAA CGGTGATTAC TATTCTAATC CGATGCCTTC ACAGGCAGCA CTGAAGGACC AGGAGATTGC CGACATCCTT TCTTATGTCA GAAACAGCTT TGGCAACAAG GCAAGTACCG TTTCAGCAAC AGAAGTAACG CAGGTACGGG GAGCCAAAAA GTAA
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Protein sequence | MGKWILAAMP LLIAGLYVSA QVKKPAKSAA KPVAASAATI ARGKALYRQY CISCHQENGS GVPRMNPPLI KTEYVLGDKP RLIGILLNGF NEDVEINGDY YSNPMPSQAA LKDQEIADIL SYVRNSFGNK ASTVSATEVT QVRGAKK
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