Gene Cpin_3619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3619 
Symbol 
ID8359786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4513847 
End bp4514296 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content48% 
IMG OID644965788 
ProductOsmC family protein 
Protein accessionYP_003123282 
Protein GI256422629 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1764] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID[TIGR03561] peroxiredoxin, Ohr subfamily 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.108059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0000417493 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAACGA ATAACAACAC AACAACAAAA GTATTCACGC CGGTAGAAAA AGTATTGTAT 
ACAGGTAGAA CTCATACGAC AGGTGGAAGG GATGGGGTAT CCCGTAGTGA TGACGGTAAA
CTGGATATTC AACTGACCTC TCCGGGTTTC CCTGGCTTTG GTACCAATCC TGAACAATTG
TTTGCCGCCG GCTGGTCCGC TTGTTTTATC GGTGCAATGA GACTGGCAGC AGGACAGCAA
CATATGAAAC TGCCGGAGGG CAGTTATGTG GATGCAGAAG TGGACCTGGG TTCCAATACC
AATGGTTTCC AGTTACAGGC CCGTTTGAAA ATACACCTGC CTGGTCTGGA TACAGAAACA
GCGCAGTTAC TGGTAGATGC CGCCCATAAG ACTTGTCCAT ATTCCAAGAT GTCCAGGGGC
AATATTGATG TGAACATCAG CCTGGTCTAA
 
Protein sequence
METNNNTTTK VFTPVEKVLY TGRTHTTGGR DGVSRSDDGK LDIQLTSPGF PGFGTNPEQL 
FAAGWSACFI GAMRLAAGQQ HMKLPEGSYV DAEVDLGSNT NGFQLQARLK IHLPGLDTET
AQLLVDAAHK TCPYSKMSRG NIDVNISLV