| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3618 |
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| Symbol | |
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| ID | 8359785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4513021 |
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| End bp | 4513809 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644965787 |
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| Product | protein of unknown function DUF1223 |
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| Protein accession | YP_003123281 |
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| Protein GI | 256422628 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5429] Uncharacterized secreted protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.087325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000138491 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGACTGG TTAGCGTGTT TTTTTTCAGT GTAGCACTTA TTGGAATGTT TATCGCAATG
GTAGCTTTCT CCGATCTGCG GAACGAAAAG GTAATCAAGC ATTTGCAGAC AACCACCGAC
AGTAAGGGCT TTGCCGTGGT AGAACTCTTT ACTTCAGAGG GATGTTCAAG TTGTCCACCG
GCAGATGAAC TGATGGGTAG AATTGAAAAA GGCAATAAAA ACGAAAGCAT CTATATACTG
ACTTATCATG TTGACTACTG GGACAGACAG GGTTGGAAAG ACAAGTTCAG CGATCATGCC
TTTTCACAGC GCCAGGAGTC TTATGCGAAC TGGCTGAATC TGTCCAGTGT CTATACACCA
CAATTGGTAG TCAATGGCGC TAATGAATAT ATAGGTTCCG ACGAGCATTC CGTAATAGGT
GGTATTGCAG ATGCCCTGGA TCAGACACCA GCCACTACAC TCACGCTGCA TAGCGTAAAA
GATGGCGGCA AACTGACCAT TAGTCATGAA GAAACAGCAA TAAAGAAAAA CACAAAGCTT
GTGCTGGCGC TGGTACAGAA AGAAGGGGAG AGTAATGTAA GAGCGGGTGA GAATGCAGGA
AGAAAACTCT CGCATGTACA GATTGTAAGG GCTTTAAAAG AAGTACCTGC CGGTGACAAA
AAAGACGTGA CCCTGGATCT GCCGGCTGAT TTTTCGACAC AAGGATGGGA ACTGATCGGC
TTTTTACAGA ACAGTAATAA TGGGCATATC ATCGCAGCAA CAAAAGTTGA TTTTCAGACA
AATAACTAA
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| Protein sequence | MRLVSVFFFS VALIGMFIAM VAFSDLRNEK VIKHLQTTTD SKGFAVVELF TSEGCSSCPP
ADELMGRIEK GNKNESIYIL TYHVDYWDRQ GWKDKFSDHA FSQRQESYAN WLNLSSVYTP
QLVVNGANEY IGSDEHSVIG GIADALDQTP ATTLTLHSVK DGGKLTISHE ETAIKKNTKL
VLALVQKEGE SNVRAGENAG RKLSHVQIVR ALKEVPAGDK KDVTLDLPAD FSTQGWELIG
FLQNSNNGHI IAATKVDFQT NN
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