| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3611 |
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| Symbol | |
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| ID | 8359778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4504135 |
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| End bp | 4505835 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965780 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003123274 |
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| Protein GI | 256422621 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.716129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000346414 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCCTCA AGACGAAATT AAGTATAGGC ATCGGATTCT TATTTATCGC AATTCTTATC
TCCGGTATCC TGGGTATCTA CTCCATACAC CAGCTGAAAA AAGACGCGCG TCTTATACTG
GAAGACAACT ACGAAACCCT TGTGTACAGC AACAATATGC TGTCCCTCAT GGATCGTGTA
CCTTTTGATT CAGCCGTACT ACGTGAGTTC AACGATAACC TGGTAAAACA GGAAGCCAAT
ATCACCGAAC GGGGGGAAGC GGCAGCGACT GCCGCCGTCA GGAATATTTA CGAACAACTG
AAACATCACC CCGATAACGA CTCCTTACAA AGTATTATCC GCCGGAAGAT ATACCAGATC
AATACCGCTA ACCAGCAGGC CATCTTTCGT AAAAATACCC TGGCAGAAAG TAATGCAAGA
CGCTTCAGCA ATTTCACCAT GATCATCTTC GGCTTTCTGG CGCTCATTGC ATTTACGCTG
GCAGTTAACT TCCCCGGTAT TATCAGCGAA CCGGTAAAAG CACTTTCTGA TGGTATAAAA
GCGATCGTAA ACAAAGACTA TTCTAAAAGG ATCCGGATCT CACAGCATGA CGAATTCGGA
GAACTGGCAC AGGCTTTTAA CAGTATGGCC GAAAAGCTAG ATGAATACGA ACATAGTAAT
CTGGCGAAGA TAAAATTTGA GAAGAGCCGT ATCGACACCA TCATCAACCA GATGAATGAC
GGTATTATCG GACTGGACGA AAGCAGGAAC CTGCTCTTCC TGAATAAAGT CGCAGAGAAA
CTACTCGGAC TCCGGGAAGT GGAGATCATG GGACAATATG CACCGGATAT CGCCGTCAAT
AATGACCTGA TGCGGAGTCT CCTGAAAACG GATAGTCCGG TGAAGGAGCT AAAGATCTTT
GCCGATCAGA AAGAAAGTTA TTTCCACCTC GATATACTCA ATGTCACCAA TAACGAAAAA
GTGATTGGTC AGGTGATCGT ATTGCGGAAT ATCACCCCTT TCCATGAACT GAATGAGGCA
AAAACCAACT TCATTGCCAC CATTTCACAC GAACTGAAAA CACCGATCGC TTCTATCAAA
ATGAGTGCAC AGCTGCTGAC CGACACCCGT GTGGGAGCTG TCAACAGGGA ACAGGAAGAA
CTGGTGAAGA GCATTGCAGA TGATGCCAAC CGCCTGTTAA AGATTACCAG TGAATTGCTG
AATATCAGTC AGGTGGAAAC GGGACATATA CAATTGAAAA TAGAACCCGT ATTCCCCGAT
ATTATCATTG ATAATGCCAC AAATACCGTC AGCGCACTCG CACAACAGAA GAATATCGCC
ATACGTATTC ACAACAACAC CCATGCCCAT AAGATCATGA CGGACCCGGA GAAAACAGCC
TGGGTACTGA CGAATTTCCT GACCAATGCC GTGAAGTATT CTCCGGAAGA TGGTGAGATT
GACCTGACTA CCAGCATCCG GAATAACAGC GTCGAGTTTT CTGTGGCAGA TCATGGACGG
GGTATTGAAG AAAAGTACCT TTCCAGGATT TTCGACCGGT ATTTCAAAGT ACCGGGTACA
CCGGAGAAAG TAGGTACAGG ACTAGGACTG TCCATCTCCC GTGAGTTTAT AGAGGCACAG
GGAGGAACGA TATGGGTAGA CAGTACGCTG GGAGAAGGAA GTACGTTTGG ATTTACACTC
CCCCTGTTTA CCGCGGAATA A
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| Protein sequence | MRLKTKLSIG IGFLFIAILI SGILGIYSIH QLKKDARLIL EDNYETLVYS NNMLSLMDRV
PFDSAVLREF NDNLVKQEAN ITERGEAAAT AAVRNIYEQL KHHPDNDSLQ SIIRRKIYQI
NTANQQAIFR KNTLAESNAR RFSNFTMIIF GFLALIAFTL AVNFPGIISE PVKALSDGIK
AIVNKDYSKR IRISQHDEFG ELAQAFNSMA EKLDEYEHSN LAKIKFEKSR IDTIINQMND
GIIGLDESRN LLFLNKVAEK LLGLREVEIM GQYAPDIAVN NDLMRSLLKT DSPVKELKIF
ADQKESYFHL DILNVTNNEK VIGQVIVLRN ITPFHELNEA KTNFIATISH ELKTPIASIK
MSAQLLTDTR VGAVNREQEE LVKSIADDAN RLLKITSELL NISQVETGHI QLKIEPVFPD
IIIDNATNTV SALAQQKNIA IRIHNNTHAH KIMTDPEKTA WVLTNFLTNA VKYSPEDGEI
DLTTSIRNNS VEFSVADHGR GIEEKYLSRI FDRYFKVPGT PEKVGTGLGL SISREFIEAQ
GGTIWVDSTL GEGSTFGFTL PLFTAE
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