Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3608 |
Symbol | |
ID | 8359775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4499483 |
End bp | 4500850 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644965777 |
Product | hypothetical protein |
Protein accession | YP_003123271 |
Protein GI | 256422618 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.907204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000266033 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAGG TAATTTTAGT ATTTGCGCTG GCTACAAAAG CTGTATGCGC AATTGCACAG GACACTACTT CTGTTACGGA AAAAATTCCG TTCGATGGTA TTGACCAGAC CTGGCAAAAT GGAAGCGACA GAAGAGAATA TTCTGTATTT CAAGACATGA AGTTTTTTAC ACCAAGTATT TTAATGGATG TAAACTATAC ACATTCCTTT AATAAACCGA ATGACAATAC AGTAGTAGGT TCTACTGCAT TGGCCCGTAA TAATGAGGTG CAGCTGTCGG CACTGCATTT CGGTGGTGAT TTTTACTATA AAGGCGCCCG CGCAAGAGTA ATGACACAGT TTGGCACCAG ATCTATAGTC GTGCCACGTA ATGACGTTAG TCCTTATCGT GGCCAGTATC AGTTGGCAAA TGTTTATCGT TATTTAAGTG AAGCTTATGT CGGTTATCAT ATTAATAAAT GGTATGGTAT TAATATCGAT GGGGGGATGT TCATGAGTTA TATCGGGTTG AATTCCTACT ATCAGCCGGA AAACTGGGAA TACCAGGCAT CTTTTACATC TGATAACACA CCCTGGTTTT TCAATGGTGT ACGTGTGCAG ATCTATCCTA CAAAGAACCT GAAGATAGAA CCATGGATTA TCAACGGATG GCAGAGCTAT GGTAAGTTTA ATAAAATGCC AGGCCTTGGT TTTAACATTA CCTGGATGCC TGACAACAGT AATCTGAAAT TGCTCACCAA CGACTACTAT GGTACTGATG CAGGTGGACT GCCTGACAGA AAACGCTTCC ATTCGGACAA TAGTTTACTT GTAAGATATT TTAACAGACC TAAGTCAAAA GGTATCAGCC GTATGGCATT TTCTCTGACT GCCGATGTTG GCTTTGAAAA AGGTGGTGGC GTGAATGGCT TCAAGAATGA TAGCGTGAAA GGTCCCGCTC AGTATTTCGC AAGTGCAATG TTTTACAACC GTATTTGGTT TAACAATAAC AAATTTGCAT GGACAGTTGG TGGTGGGGTG ATGACTAATC CTGGAAGATA TCTGGTACTT TATCCTACAG GTCAGGCAAG CCCTTTACCT AATCCCAACA ACCCGACGCA AACTGAGGGT GCATATCCTT TCAGTGCTAA TCCGGGCGAC AAATTTAAGG GATGGGATAT GTCTACTAAC TTTGATTATA TGCCCAACCA GAGTATAACA TTCCGTTTTG AACTGGTAAA TAGACATTCC GATGTGCCTT ATTTTGCGGG TGAAGGTGGG GTAACTTCTC AGACAGGTTA TTCAACGACT CCATTAGATC CTAACTGGCG TCCTGATCTG GTAAAGTCTG AAACTAGATT TATTCTTGCC GCTTTATTCA GATTGTAA
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Protein sequence | MKKVILVFAL ATKAVCAIAQ DTTSVTEKIP FDGIDQTWQN GSDRREYSVF QDMKFFTPSI LMDVNYTHSF NKPNDNTVVG STALARNNEV QLSALHFGGD FYYKGARARV MTQFGTRSIV VPRNDVSPYR GQYQLANVYR YLSEAYVGYH INKWYGINID GGMFMSYIGL NSYYQPENWE YQASFTSDNT PWFFNGVRVQ IYPTKNLKIE PWIINGWQSY GKFNKMPGLG FNITWMPDNS NLKLLTNDYY GTDAGGLPDR KRFHSDNSLL VRYFNRPKSK GISRMAFSLT ADVGFEKGGG VNGFKNDSVK GPAQYFASAM FYNRIWFNNN KFAWTVGGGV MTNPGRYLVL YPTGQASPLP NPNNPTQTEG AYPFSANPGD KFKGWDMSTN FDYMPNQSIT FRFELVNRHS DVPYFAGEGG VTSQTGYSTT PLDPNWRPDL VKSETRFILA ALFRL
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