| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3554 |
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| Symbol | |
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| ID | 8359721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4430917 |
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| End bp | 4431897 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644965725 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003123219 |
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| Protein GI | 256422566 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0813292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.017329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCATC ATCCACCCGG CAGAGCACAG CTCATTGCCT ATTTTGAAGG TAAGATTACA
GACGCCGCCA GTAGGGAGGC AATTGAAGCA TATATCGCGG CTGATACAGA TCCGCTGCTG
GTACAAGCCT GTATGCAGAC TGCCTGGAAG CATATCCCGG AAGCCGATGT ACCGCAAAGT
ACACCAGCGG ACTGGGACCA GTTCCGGATG ATGGCAGGTA TACGTACATC TCCGAAAAGA
TTCCTTCGTC CGATGCTGGC AGCTGCCGCT ACTTTATTAT TACTCCTTTC TGTATCCTAT
ATCTATTTTA TACTCCGCAA GCCAGCCGTC AATACGCCGC TTGCCTGGCA GGAGATCACT
GCCGGTCCAC GGGAACTACG CACCATCCGC CTGCCCGACG GCAGTGATCT CACACTTTTC
CCCGGATCAA CAGTCAGCTA TAACAATGAA TACAATAAAC ATGCACGTGC CATCAGACTA
AAAGGACGCG CCTATTTTAA CGTCGCTACT GTTGCGGATA AACCATTTAC TGTTTCCGCC
GGTAACTATA CCACGCAGGT ACTGGGTACC TCCTTTGAAA TATTTGAACG TCCACAACGA
CAGGAGCTCT CAGTCGTTCT GGTATCAGGT AAAGTCAGAC TGTTAAATGC GCAGCAACAG
CCCTTATCTG AGCTGCGACC GGATCAGCAG ATGACCATCC ACACCGACAA TGCCCGCTTC
AATATCCTGC CTGTCGCGGC AAAGACGATG GTTGCCTGGA CCACAGGAAA ACTCTCTTAT
GATCAGGCGA CACTGGCAGA CGTCTGTCGC GAACTGGAAA AATGGTATGG GGTCAATATC
ACGATACAGC GGCCGGCATT GGAGAAGAAG CGTATTACGG CCGACTTTGA ACACCTTTCC
CTGACAGCCG TCCTGCATAT CCTGTCAGAG ACTGCAGGCT TTAACTATAA AGAGAAGGAC
AATCACATAG CAGTATACTA A
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| Protein sequence | MIHHPPGRAQ LIAYFEGKIT DAASREAIEA YIAADTDPLL VQACMQTAWK HIPEADVPQS
TPADWDQFRM MAGIRTSPKR FLRPMLAAAA TLLLLLSVSY IYFILRKPAV NTPLAWQEIT
AGPRELRTIR LPDGSDLTLF PGSTVSYNNE YNKHARAIRL KGRAYFNVAT VADKPFTVSA
GNYTTQVLGT SFEIFERPQR QELSVVLVSG KVRLLNAQQQ PLSELRPDQQ MTIHTDNARF
NILPVAAKTM VAWTTGKLSY DQATLADVCR ELEKWYGVNI TIQRPALEKK RITADFEHLS
LTAVLHILSE TAGFNYKEKD NHIAVY
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