Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3548 |
Symbol | |
ID | 8359715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4421506 |
End bp | 4423023 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965719 |
Product | hypothetical protein |
Protein accession | YP_003123213 |
Protein GI | 256422560 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0896627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0134633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAT TGCACCTACT AGCCATCTGT AGCCTGTTGT TTTTATCCTG TAAAAAGGAA AAGGAAAAGG AAATCACCCT ACCTATCCAG TATGAGGCGA CACACTATTA CGTAAGTCCG GGCGGGAATG ATGCCAACGA CGGCTTATCC GCAGCTAAAC CATTCAGAAC CATCCAGAAA GCAGCCGATC TGGCACAACC GCGTTGCACC GTGCATCTGG CAGGGGGAGA ATATAAACAG CAACTGGAGA TAAAAGTGTC TGGTACTGAT ATTCACCCTA TTGTATTCAT GTCTGATCCT TATGTGCCTG CTGTGCTTAC ACAGGGAGGA GAAAATGATG CGATCCTTAC CATAGAGGAC CAGCATAATA TTTACATTCA GGGCATTCAT GTCGCCAATC TGACCCGCAA CAATGCACAG GGTATCCTCA TCAGGGCGAC ACCTGACGGA GGCGTGAGCA ATATTGTGCT CAATGGCGTG AACGTGTATA ACATTGCCTG GACCACGCAG CCGACGAAAA CACCGGGAGA AAATGACAAT GCGCAACCGA TCATTATATA CGGAGAAGGG AAAGCGCAAC AGAACGCCGT ATCCGGGGTC TCTTTATACA AGTGTAAAGT CTATAACAAT GTGACCGGTT TCAGCGAAGC AGTCTCCCTG GATGGGAATG TCGATGGCTT CTCTATCGGT TCCTGCGAAG TCTATAACAA TACAAATATT GGTATTGCTG CCATCGGCAA TTATGGCGTC AGCAGCACCG CCGCTGTAGA CCAGGCAAGA AACGGCAGGA TCACGGATAA CTACTGTTAT GATAACATCT CTTCTTATGC GACCAGTGCC GGTATTTATG TAGATGGCGG CAGCAAAATC TTTATTGCCC GGAATCGTTG TAAAAACAAC GGATACGGGA TAGAGGTAGG TTGTGAAGAG AATGGCAGCG CCAGCGATAT ACGTTTATTG GGCAATGTGA TGGAAGGTAA CCAGGAAGCA GGTATGGCCC TGGGTGGATA TGATGCAGGC ACCAGCGGAC AGGTACTAAA ATGTCTGGTG GTGAATAATA CCTTTTTTCA GAACGGTATA GCAGGTGCCG GCGGCGAACT GGCCATTACC AAAGCATCAG ACTGTAAGAT CATGAACAAC ATATTTTACG GTGGTACTTC CTTGCTGTTG TATGGAGAAA AGATCAGTCC ACAGCAGAAT AATACGTTTG ACTACAATTG CTGGTTCACA ACTGTAGCAG GTGGTCCGCT CTTTACCTGG GCAGGTAAAA ACTACAACAC GTTCGACGCC TGGCAGAGTG GAACAAAACA GGACCTGTCT TCCCTGAACT TTGATCCTAA GTTTGCAAGT ATACAGCGCA ATAATATAGA TCTGCATCTG CAGACGGGAA GCGGGCTCCG GAAACAGGCG AATGCCGCCA TTCTTTCCCT GGTACAGCCC ACAGATGTTT TTGAACAGGA TCTGGATCGT ATATCCTTTG GAGACGATTA TCCCACTATT GGCGCTTACC AGAAGTAA
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Protein sequence | MKPLHLLAIC SLLFLSCKKE KEKEITLPIQ YEATHYYVSP GGNDANDGLS AAKPFRTIQK AADLAQPRCT VHLAGGEYKQ QLEIKVSGTD IHPIVFMSDP YVPAVLTQGG ENDAILTIED QHNIYIQGIH VANLTRNNAQ GILIRATPDG GVSNIVLNGV NVYNIAWTTQ PTKTPGENDN AQPIIIYGEG KAQQNAVSGV SLYKCKVYNN VTGFSEAVSL DGNVDGFSIG SCEVYNNTNI GIAAIGNYGV SSTAAVDQAR NGRITDNYCY DNISSYATSA GIYVDGGSKI FIARNRCKNN GYGIEVGCEE NGSASDIRLL GNVMEGNQEA GMALGGYDAG TSGQVLKCLV VNNTFFQNGI AGAGGELAIT KASDCKIMNN IFYGGTSLLL YGEKISPQQN NTFDYNCWFT TVAGGPLFTW AGKNYNTFDA WQSGTKQDLS SLNFDPKFAS IQRNNIDLHL QTGSGLRKQA NAAILSLVQP TDVFEQDLDR ISFGDDYPTI GAYQK
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