Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3529 |
Symbol | |
ID | 8359696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4395121 |
End bp | 4395978 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644965700 |
Product | hypothetical protein |
Protein accession | YP_003123194 |
Protein GI | 256422541 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.127751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTACA AATTACTGAT CGCCGTTTTA CTGCTGACAA CATCTGTTTA TGCGCAGCGC CCATCCCTGC CAACAACACC TCTTGACATT ACAGCGCGAA TCTTCGATAA AGAAGGATTC CGCCAGATAT CTAAATTTAG TACCGGAGAA TATAAAGGAC ATCCCCGTGG GACAGACCTG AGTAAAGACG CCTCTTGTCA GTTTACACTG CTCAAACAAT CTGCTGAGCA GGCTGTTGTG GCTGTCACTA TTCTTTCTCC TGCTGAAGAA GGTCTGGACC TATACCTCCA TTTCATAAAA GAAGACGCAA CATGGAAAGT CAAAGCCTGC AGAGCGTTGG CGATGACTGG TATGATTCAG CGAATGAGAG ACGAAATGAA GAAATTAACG CTTAATCAGG TAGATTCGAT CATTGAAGCG GAAAAGAATT CCGATAAGGA GTATAAGTCC TTTACCTCCC GTGATCATTA TTATTATGAG TTAGGTAATG CCGATCTGAC GCTTAAACAG GATGATAACA TCATTAAGCA TTTCAACGAT CACAAAGCTA AATTTGAGCA ACTCAAAGAC GCTGCACTGA AGGAGCTGCA GGAGAATAAA GAAGATCATG CTGAACGGCA GATACGTCTT ATTAAGTCCA GAGAGAACGA ATACCACCAG CTTTTCATCA GCAATGTCAG TTACGGCGGG TACATGATCA GCGAACATTG CCTTACCTTT TTAATAGGAG GAATGCTGGA TAATACCGTC GGCTATTTAT ACGTGCAGGA TAAAAAGGAT CTGCCGGAAA TGAGTGACAA CAGGGTTATT ATGCTCCGCG AAATAGGAGA AGGGTGGTAC TTATACAAGA CCACCTGA
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Protein sequence | MFYKLLIAVL LLTTSVYAQR PSLPTTPLDI TARIFDKEGF RQISKFSTGE YKGHPRGTDL SKDASCQFTL LKQSAEQAVV AVTILSPAEE GLDLYLHFIK EDATWKVKAC RALAMTGMIQ RMRDEMKKLT LNQVDSIIEA EKNSDKEYKS FTSRDHYYYE LGNADLTLKQ DDNIIKHFND HKAKFEQLKD AALKELQENK EDHAERQIRL IKSRENEYHQ LFISNVSYGG YMISEHCLTF LIGGMLDNTV GYLYVQDKKD LPEMSDNRVI MLREIGEGWY LYKTT
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