Gene Cpin_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3529 
Symbol 
ID8359696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4395121 
End bp4395978 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content43% 
IMG OID644965700 
Producthypothetical protein 
Protein accessionYP_003123194 
Protein GI256422541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.127751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTACA AATTACTGAT CGCCGTTTTA CTGCTGACAA CATCTGTTTA TGCGCAGCGC 
CCATCCCTGC CAACAACACC TCTTGACATT ACAGCGCGAA TCTTCGATAA AGAAGGATTC
CGCCAGATAT CTAAATTTAG TACCGGAGAA TATAAAGGAC ATCCCCGTGG GACAGACCTG
AGTAAAGACG CCTCTTGTCA GTTTACACTG CTCAAACAAT CTGCTGAGCA GGCTGTTGTG
GCTGTCACTA TTCTTTCTCC TGCTGAAGAA GGTCTGGACC TATACCTCCA TTTCATAAAA
GAAGACGCAA CATGGAAAGT CAAAGCCTGC AGAGCGTTGG CGATGACTGG TATGATTCAG
CGAATGAGAG ACGAAATGAA GAAATTAACG CTTAATCAGG TAGATTCGAT CATTGAAGCG
GAAAAGAATT CCGATAAGGA GTATAAGTCC TTTACCTCCC GTGATCATTA TTATTATGAG
TTAGGTAATG CCGATCTGAC GCTTAAACAG GATGATAACA TCATTAAGCA TTTCAACGAT
CACAAAGCTA AATTTGAGCA ACTCAAAGAC GCTGCACTGA AGGAGCTGCA GGAGAATAAA
GAAGATCATG CTGAACGGCA GATACGTCTT ATTAAGTCCA GAGAGAACGA ATACCACCAG
CTTTTCATCA GCAATGTCAG TTACGGCGGG TACATGATCA GCGAACATTG CCTTACCTTT
TTAATAGGAG GAATGCTGGA TAATACCGTC GGCTATTTAT ACGTGCAGGA TAAAAAGGAT
CTGCCGGAAA TGAGTGACAA CAGGGTTATT ATGCTCCGCG AAATAGGAGA AGGGTGGTAC
TTATACAAGA CCACCTGA
 
Protein sequence
MFYKLLIAVL LLTTSVYAQR PSLPTTPLDI TARIFDKEGF RQISKFSTGE YKGHPRGTDL 
SKDASCQFTL LKQSAEQAVV AVTILSPAEE GLDLYLHFIK EDATWKVKAC RALAMTGMIQ
RMRDEMKKLT LNQVDSIIEA EKNSDKEYKS FTSRDHYYYE LGNADLTLKQ DDNIIKHFND
HKAKFEQLKD AALKELQENK EDHAERQIRL IKSRENEYHQ LFISNVSYGG YMISEHCLTF
LIGGMLDNTV GYLYVQDKKD LPEMSDNRVI MLREIGEGWY LYKTT