Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3478 |
Symbol | |
ID | 8359644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4343036 |
End bp | 4343503 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644965651 |
Product | YiaAB two helix domain protein |
Protein accession | YP_003123146 |
Protein GI | 256422493 |
COG category | [S] Function unknown |
COG ID | [COG4682] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCGC TACAAAACAA AACAGAAGAT AACTCCCCCG CCCCCAAACA TGGCGAAAAG GGTAGAAACC CATTTAAACC GACTGCCGCA TTCATAGGTG CTTCCTGGAT TGCCCTATTA ACAGGAGCAG TGGGATATTG CATCGGTTTA TGGAATGCAA ACATGCAGTT AAACGAAAAA GGATATTATT TAACCATCTT ATTATTTGGT CTGTTCGCAG TAGTCTCTGT GCAAAAAAGC GTTAGAGATA GGGCGGAAGG ACTTCCTGTT ACAGACCTGT ACTACGGTCT GAGCTGGTTC GCCACTATTT CATCCATGCT TTTGTTAACC ATTGGTCTGT GGAATGCAGG GATCGCACTG AGTGAGAAAG GTTTTTACGC AATGGCATTC GGTTTAAGTA TGTTTTCGGC CATTGCCGTA CAAAAGAACA CCCGCGACTC GAAGATGTTC CAGGACAAAG AACTGTAA
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Protein sequence | MEPLQNKTED NSPAPKHGEK GRNPFKPTAA FIGASWIALL TGAVGYCIGL WNANMQLNEK GYYLTILLFG LFAVVSVQKS VRDRAEGLPV TDLYYGLSWF ATISSMLLLT IGLWNAGIAL SEKGFYAMAF GLSMFSAIAV QKNTRDSKMF QDKEL
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