Gene Cpin_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3360 
Symbol 
ID8359526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4123672 
End bp4124163 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content43% 
IMG OID644965533 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003123028 
Protein GI256422375 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.033004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.361992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACA GGAACGCTAC GCAGGAAGAT CTTCCGGAAA TTGTCGCTAT TTACAACACA 
ACTATTGCAG GTCGTATGGT AACGGCCGAT ACAGAACCGG TTACTGTGGA AAGCAGACAG
CATTGGTTTG ACATTCATTC TCCGGAAAAA CGTCCTTTAT GGATGGTAGA AGATGAAGGT
GTTTCCGTGG GATGGGTCAG TTTTCAATCT TTTTATGGTC GTCCGGCGTA TGACGGCACT
GCCGAGATCA GTATTTACCT GCATGAAAAT ACACGTGGTA AAGGATATGG TAAGAAAATC
CTGGAATATG CAATGGAACA GTGTCCTGCC ATTAAAGTAC ATACTTTACT CGGTTTCATC
TTTGCGCATA ACATTCCCAG TTTGAAGTTG TTTGAACAGT TAGGATTTAA AGAATGGGCG
CACCTTCCGA ATATTGCGGT GCTGGATGGT GTAGAAAGGA GCCTGAACAT ACTTGGTAAA
AGAATCTATT GA
 
Protein sequence
MNYRNATQED LPEIVAIYNT TIAGRMVTAD TEPVTVESRQ HWFDIHSPEK RPLWMVEDEG 
VSVGWVSFQS FYGRPAYDGT AEISIYLHEN TRGKGYGKKI LEYAMEQCPA IKVHTLLGFI
FAHNIPSLKL FEQLGFKEWA HLPNIAVLDG VERSLNILGK RIY