Gene Cpin_3326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3326 
Symbol 
ID8359492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4089824 
End bp4090396 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content42% 
IMG OID644965499 
ProductYceI family protein 
Protein accessionYP_003122994 
Protein GI256422341 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000103156 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAA TCACAATCAT CGCCTCTTTA CTGGCACTTT CCGCAACAAC ATTTGCACAA 
TCTAAATGGT CTGTAGATAA AGCACACGCT AGACTGGGTT ACACTATTTC CCACATGACA
CTGTCTGAAA GTGAAGGTAA CTTCAAATCT TACACTGCTG ATATCACTGC TTCTAAAGCT
GATTTCTCTG ACGCTTCTTT CAACATCAGC ATCGATGTAG CTAGTCTGAA CACAGAAAAC
GAAATGCGTG ACAAACACCT GAAAAGTGCA GATTTCTTTG ATGCAGAAAA ATATCCTACC
ATCACTTTCA AGAGCACTTC CTTCAAGAAA ACAAGTGGTA ATCAGTACAG ACTGGTGGGT
GATCTGACCT TCCACGGTGT AACTAAACAG GTAATGCTGA ACGCAGTATA CAACGGTACC
CAGGAGAATG CACAGAGCAA GAAACTGGTT GCTGGTTTTA CTATCACTGG TACTTTCAAA
CGTAAAGATT TCGGTTTCGC TACAGAAGCT CCTGCTACCA TGCTGGGTGA AGATGTTAAG
CTGAGGGCAA GTGGTGAATT CGTAAAAGAA TAA
 
Protein sequence
MKKITIIASL LALSATTFAQ SKWSVDKAHA RLGYTISHMT LSESEGNFKS YTADITASKA 
DFSDASFNIS IDVASLNTEN EMRDKHLKSA DFFDAEKYPT ITFKSTSFKK TSGNQYRLVG
DLTFHGVTKQ VMLNAVYNGT QENAQSKKLV AGFTITGTFK RKDFGFATEA PATMLGEDVK
LRASGEFVKE