| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3302 |
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| Symbol | |
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| ID | 8359468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4066904 |
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| End bp | 4067722 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965475 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003122970 |
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| Protein GI | 256422317 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000075991 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGA CAGTATTCAT TACAGGTACC AGCAGCGGAC TGGGTAAGCT GACCGCTAAA
TATTTTGCAT CACAGGGTTG GAATGTAGCC GCTACCATGC GTACACCAGA GAAAGAAACA
GAGCTGACGC AATATGAAAA TATAAAGATC TTTAAACTGG ATGTGACGGA TATCGCACAG
GTAAATACAG CAGTAGCAGC GGCGGTTGCT GCATTCGGTA AAATTGATGT CGTAGTAAAT
AATGCGGGGG CAGGCACATA CGGTGCATTG GAGTTGGCAA AAGAAGAAAC AATTGACTGG
CAGTTTGCAA CAAACGTACG CGGCCCTATC AATGTTATCC GTGCCTTCCT GCCGCATTTC
AGGGCACAGA AAGGAGGGAA GTTCATCAAC ATCAGTTCCT TCATGGGCGT GACTACCGCC
GTACCTGTCG GCTCTTTATA TAACATGTCC AAATTTGCAC TGGAAGGACT GACCGAAGGA
CTGTATTATG AACTGGAGCC ATTGAATATT AGTTTGCACC TGATAGAACA GGGCGGATCG
AGTGGTAACA GTTTCGTAGA TAAAGTCATT TGGAATGAAC ATCCGGAAAT AACGGATTAC
GAAGCCATTA CAACACGCGT CAGGCAGATG ATGCAGGAGG CAAAGAATGG CCCGCTGGAC
GATCCGCAAA CCATTGTAGA TGCTATCTAC GCCCTGGCTA CCGGCGCCAG TAAACAGTTC
CGTACTGTAC TGAGCGCAAT GGGTAATCAA CTGATGGAAA TGCGTAGATC AATGCCAATA
GAAAATTATC TGGACACAGT GGCTGGATGG TATAAGTAA
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| Protein sequence | MKKTVFITGT SSGLGKLTAK YFASQGWNVA ATMRTPEKET ELTQYENIKI FKLDVTDIAQ
VNTAVAAAVA AFGKIDVVVN NAGAGTYGAL ELAKEETIDW QFATNVRGPI NVIRAFLPHF
RAQKGGKFIN ISSFMGVTTA VPVGSLYNMS KFALEGLTEG LYYELEPLNI SLHLIEQGGS
SGNSFVDKVI WNEHPEITDY EAITTRVRQM MQEAKNGPLD DPQTIVDAIY ALATGASKQF
RTVLSAMGNQ LMEMRRSMPI ENYLDTVAGW YK
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