| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3299 |
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| Symbol | |
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| ID | 8359465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4065101 |
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| End bp | 4065940 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965472 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003122967 |
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| Protein GI | 256422314 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000868521 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAACA ACAACAACAG AGTATGGTTT GTAACTGGTG CTTCCAAGGG ATTGGGATTA
AGCCTGGTAA AACAGCTGCT GGCCACAGGT CAACGCGTGG CAGCAACATC AAGAAAGATA
GGAGAACTGG TAAAGGCGGT AAGTGAACAG TCTGCAGATT TCCTCCCACT GGAAACTGAC
CTGGTGAGTG AAACCAGTGT AACAGCAGCG ATTGAAAAGA CAATTGCTAC TTTCGGCAGA
CTGGATGTCG TAGTAAACAA TGCGGGTTAT GGTATCGGCG GTAGTATAGA AGAACTGACT
GATAAAGAAA CCCGGGATGC CTTCGACGTC AATGTTTTCG GTACACTCAA TGTGATCCGC
CTGGCAATGC CGCAGTTAAG GGCACAGCGT TCAGGACACA TCATCAATAT CTCATCCATC
GCAGGTATTG CGCCAGCCAC CGGTTGGTCC ATCTATGGTG CAGCAAAACA TGCGGTGATA
GGTCTGAGCG AAGTACTGGC AGAAGATGTG AAAGAGTTTG GTATCAAAGT GACCGTTGTA
GCGCCGGGCG CATTCAGGAC CAGTTTCCTG ACAAAAGAAT CACTGACCAT GGCGAAAAAT
AAGATTCCGG AATATACCGC TATCAGAAAT TCGCATGAGA AATACGAGTC AATGGATGGT
CAACAGGCAG GAGATCCTGA CAAAGCAGCG GCAGCCATGA TCGCGATTGT CAACGAACAA
AAGCCTCCTG TATACCTGTT ACTGGGTTCA GATGCTTACG AACGGGGTAT GGCTAAACTG
GAGTTATTGA AAGACGCTTT TAAAGAAAAA GAAGCATTGA CAAAATCTAC CAGCTTTTAA
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| Protein sequence | MSNNNNRVWF VTGASKGLGL SLVKQLLATG QRVAATSRKI GELVKAVSEQ SADFLPLETD
LVSETSVTAA IEKTIATFGR LDVVVNNAGY GIGGSIEELT DKETRDAFDV NVFGTLNVIR
LAMPQLRAQR SGHIINISSI AGIAPATGWS IYGAAKHAVI GLSEVLAEDV KEFGIKVTVV
APGAFRTSFL TKESLTMAKN KIPEYTAIRN SHEKYESMDG QQAGDPDKAA AAMIAIVNEQ
KPPVYLLLGS DAYERGMAKL ELLKDAFKEK EALTKSTSF
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