Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3296 |
Symbol | |
ID | 8359462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4059850 |
End bp | 4061232 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965469 |
Product | sulfatase |
Protein accession | YP_003122964 |
Protein GI | 256422311 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3119] Arylsulfatase A and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0308085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000582836 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTACAG GATGCGCGTT ACTGACTACT ATCCTGACCC AGGGACAGAC CCATAAACCC AATATTATCT TCATTCTGGC TGACGATCTG GGATATGGTA ATATCAGCGC TTATAACAGC AAAAGCCCTG TTAAAACGCC TAATATTGAC AGACTGGGGC AGGAGGGAAT TCAATTCAAG AACTTCTATT CCGGTAATAC CGTTTGTGCG CCTTCCCGTT GTGCCCTGCT CACCGGAAAG CATATGGGAC ATGCCTATAT CAGGGGGAAT ACACGCCTTC CCTTACGTGC GGAGGACAGT ACCCTGGCGC AGCTGCTGCA AGGGAACGGT TACCGTACCG GTATGTTTGG CAAATGGGGA TTGGGAGAAT CCGGTACGAC AGGCTCCCCG GAGATCAAAG GTTTTGATAC CTTCTTTGGT TATCTGAATC AGCAACATGC ACATAACTAC TATACAGACT ATCTCTTTGA AGTAAAGGAA GGACAGATCA GCCGTGTACC CAGGGACACG AATGTCTATT CCCAGGATGA GATCCTGCAA CATGCGCTGT CTTTCATCAA TGACAATAAA GACAAGCCTT TTTTCCTTTT CCTGCCATTT ACCCTGCCAC ATGCAGAACT TGCGCCGCCA GCTACTGATA TGCAAGCCTT CCTCAATGCC GATGGCAGCA GTAAGTTAGG TCCGGAAACG CCTTATGAGC GTAAGAACGG GACCTATCGC AGTCAGGAAA ATCCACATGC AGCATTCGCA GCGATGGTCA CGAAACTGGA CAGGAACGTA GGGGAGATCA GCGCACTGAT AAAACAACTT GGTCTTGACG ACAATACTTA TATCTTCTTT ACAAGCGATA ACGGTCCGCA TAGAGAAGGT GGTGCAGACC CCATTTATTT TGACAGTAAT GGCCCCCTAA AAGGCATTAA ACGCGATCTC TATGAAGGAG GTATCAGAGT ACCCCTGCTC GTGAGAGCGC CGGGTAAAGT GTCCGCAGGA CAGGTTAGCA CCATTCCATG GGCGTTCTGG GATGTATTGC CCACTTTGAG TGATATTACG CATTCCCCTG TTTTATCCGG AATAGATGGC TTATCTTACA CAAAAGCGCT GAACGGAACG AAACCCGCAA GGCAGCATGA TCACTTCTAT TGGCAGTTTA ATGAAGGCGG ATTACAGGAA GCATTGCTGA AAGACGACTG GAAACTGATC CGCTTTAAAA AACGTGGCAC ACCCGAACGT TTTGAACTGT ACCATCTATC CGAAGACATA GGAGAAGAAC ATGACCTGGC CACAAAATAC CCACAGAAAG TGAAAGCGCT CTCCGGACTG ATGCTGCAAT CCAAAATGCC GGCGGAGAAC CCTGAGTTTG ACTGGTCGGC TACCGAACAA TAA
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Protein sequence | MLTGCALLTT ILTQGQTHKP NIIFILADDL GYGNISAYNS KSPVKTPNID RLGQEGIQFK NFYSGNTVCA PSRCALLTGK HMGHAYIRGN TRLPLRAEDS TLAQLLQGNG YRTGMFGKWG LGESGTTGSP EIKGFDTFFG YLNQQHAHNY YTDYLFEVKE GQISRVPRDT NVYSQDEILQ HALSFINDNK DKPFFLFLPF TLPHAELAPP ATDMQAFLNA DGSSKLGPET PYERKNGTYR SQENPHAAFA AMVTKLDRNV GEISALIKQL GLDDNTYIFF TSDNGPHREG GADPIYFDSN GPLKGIKRDL YEGGIRVPLL VRAPGKVSAG QVSTIPWAFW DVLPTLSDIT HSPVLSGIDG LSYTKALNGT KPARQHDHFY WQFNEGGLQE ALLKDDWKLI RFKKRGTPER FELYHLSEDI GEEHDLATKY PQKVKALSGL MLQSKMPAEN PEFDWSATEQ
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