Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3291 |
Symbol | |
ID | 8359457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4054020 |
End bp | 4055513 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644965464 |
Product | hypothetical protein |
Protein accession | YP_003122959 |
Protein GI | 256422306 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000678206 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00118262 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAGAAAT TATTCTTATA TATTCTTACC GCATTTGCTT TGAGCAGCTG CTATAAGGAC AAGGGCAATT ACGATTACAC CGATGTCAAT GTGGTGAACA TCTCTGGCGT GGACAGTCTG TATACAGTTG ACTATGGCAG TGTATTTACC CTGAAGCCTG ACCTGTCTTT TACCCTGGAT GCTACAAAGG ACACTGGCAA CTACACTTAT CTGTGGGTGG CTTCCATTAC AAATACCGGT AATACGGTCG ATAACGATAC CTTGTCCTAC GGCCATGATC TCGATGCACG TATTACCTTA CCGTCTGGTC AGTACACCGT GATATACCGG GTGACTGATA AGAAAACAGG TATCAGCTAT TCCAAAAGAT TCCTGATGGC AGTGGTGACC AGTGTATATG AAGGATGGGT ATTGCTGTCG GAAGTCAATG CGAACAGCCG ACTGGATATG CTATCTAAAG GCGTGAACGG GTACAAACCT ATATACGACG TCTTAGGCAG TATCGGCGCT GGTCTTACAT TGACAGGGAA GCCGGTGGAC GTAAAGTTTG TCCGTACCAC TTCTGCTATT ACAGGACACG CGGTATATGT CAGTACAACT GATGGCACCA GCCGTCTGGA TGGTGAAACA TTCAAGTTGA AGTCTCCTTT GCAGACAGAT GTATTCAGTA CCTTACCTGC AGGCTTCTAT GCGGACAGGT TAACCCAGCG CACGTCCGGT ACCATGTACC TGCATGGAAG TGATAATAAC ATGTACTACT ATATGTATAC GTTCAACATC TATTTTGGCT TACCGGTGAA TGTGATGTAT GGAAAATCCG TTCCTTTCAA AGTTTCAAAA TATATAGGGT ATGTTGACAA TTCAGCCGGG TCCACAGAGG TACATGTTTT ATACAATGAA GATGAAAAAC GCTTCGTGAG GCATATATAC AGTTTGCCGG CCAACTGCAC CGATATGCCT GCAGGTACGC GCTTTAGTTT CACCACTGGT AAAGACCTCC GCTTTATGGA AACCAGCCGT TTCAATAGCG GGGACACTTA TGCGATACTT GATTCTATAC ACCAGAAATA TTACCTGGCA AGATTCAATG TGGCTGCAAC CATCGCCCAG ACTTATTATG AGGAGCTACT GGCGACGGAC TTTGCAAAGG CAGAGAATAT TGCGATACAC CCTGACCTGG GCTATGTGTT TTATAATGTA GGCGGAAAAT TGTACGAGTA TGATATCAGC ACAAAAGCTA CAAAACTGAT GATAGACTAT GGTCAGAAAT CAGTGTCTTT CCTGAAATGC GATGGCTTCA TGGGTACTTC AACCGTAGCA GCGAAAGCTT ACTATAACAA ATTACAGGTG GGTGTATATG ACCCGGCCCT GCCTGCAGAA AGCGCCGGTA GCTTTGAACT CTATATGGTA CCGCCTGTGA ATGGTAACCT GGTATTGAGT GAATCTTACA CCGGCTTTGG TAAAATCAAA ACAGTCACTT ACAGAGAACG TTAA
|
Protein sequence | MKKLFLYILT AFALSSCYKD KGNYDYTDVN VVNISGVDSL YTVDYGSVFT LKPDLSFTLD ATKDTGNYTY LWVASITNTG NTVDNDTLSY GHDLDARITL PSGQYTVIYR VTDKKTGISY SKRFLMAVVT SVYEGWVLLS EVNANSRLDM LSKGVNGYKP IYDVLGSIGA GLTLTGKPVD VKFVRTTSAI TGHAVYVSTT DGTSRLDGET FKLKSPLQTD VFSTLPAGFY ADRLTQRTSG TMYLHGSDNN MYYYMYTFNI YFGLPVNVMY GKSVPFKVSK YIGYVDNSAG STEVHVLYNE DEKRFVRHIY SLPANCTDMP AGTRFSFTTG KDLRFMETSR FNSGDTYAIL DSIHQKYYLA RFNVAATIAQ TYYEELLATD FAKAENIAIH PDLGYVFYNV GGKLYEYDIS TKATKLMIDY GQKSVSFLKC DGFMGTSTVA AKAYYNKLQV GVYDPALPAE SAGSFELYMV PPVNGNLVLS ESYTGFGKIK TVTYRER
|
| |