Gene Cpin_3273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3273 
Symbol 
ID8359439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4034214 
End bp4034606 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content45% 
IMG OID644965446 
Productsec-independent protein translocase protein TatC 
Protein accessionYP_003122941 
Protein GI256422288 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.401481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0409465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG ATATCACGAC AACAGAAGAT ATACAGCTGC TGGTGAATAC ATTTTACAGC 
AGGGTAAGAG AAAATGAGAT CCTTGGATAT GTCTTTGACG ATGTTGCACA GGTAAACTGG
GAAAAGCACC TGCCTGTCAT GCACAGTTTC TGGGCAACCG TATTGTTTGG CAGGGCATCC
TTCAAGGGTA ATCCTTTGGC AAAACATACC GCATTGCATG AGCGGGTACC GCTGACAGAA
GAACATTTTG CAACATGGCT GGTACTCTGG CACGAGACAA TCGACGAACT GTTTGACGGC
AAAGTAGCCC AGAGTGCAAA AAGCAAGGCA GAACTGATGA AGATACTGAT GCTGGGCAAG
ATACAACAGC TTAATACTGC CAATGCGGTG TAA
 
Protein sequence
MKKDITTTED IQLLVNTFYS RVRENEILGY VFDDVAQVNW EKHLPVMHSF WATVLFGRAS 
FKGNPLAKHT ALHERVPLTE EHFATWLVLW HETIDELFDG KVAQSAKSKA ELMKILMLGK
IQQLNTANAV