Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3273 |
Symbol | |
ID | 8359439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4034214 |
End bp | 4034606 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644965446 |
Product | sec-independent protein translocase protein TatC |
Protein accession | YP_003122941 |
Protein GI | 256422288 |
COG category | [R] General function prediction only |
COG ID | [COG2346] Truncated hemoglobins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.401481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0409465 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG ATATCACGAC AACAGAAGAT ATACAGCTGC TGGTGAATAC ATTTTACAGC AGGGTAAGAG AAAATGAGAT CCTTGGATAT GTCTTTGACG ATGTTGCACA GGTAAACTGG GAAAAGCACC TGCCTGTCAT GCACAGTTTC TGGGCAACCG TATTGTTTGG CAGGGCATCC TTCAAGGGTA ATCCTTTGGC AAAACATACC GCATTGCATG AGCGGGTACC GCTGACAGAA GAACATTTTG CAACATGGCT GGTACTCTGG CACGAGACAA TCGACGAACT GTTTGACGGC AAAGTAGCCC AGAGTGCAAA AAGCAAGGCA GAACTGATGA AGATACTGAT GCTGGGCAAG ATACAACAGC TTAATACTGC CAATGCGGTG TAA
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Protein sequence | MKKDITTTED IQLLVNTFYS RVRENEILGY VFDDVAQVNW EKHLPVMHSF WATVLFGRAS FKGNPLAKHT ALHERVPLTE EHFATWLVLW HETIDELFDG KVAQSAKSKA ELMKILMLGK IQQLNTANAV
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