Gene Cpin_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3226 
Symbol 
ID8359391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand+ 
Start bp3982070 
End bp3982606 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content49% 
IMG OID644965398 
Productdomain of unknown function DUF1738 
Protein accessionYP_003122894 
Protein GI256422241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.60789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTTT CATTCGAACA ACACGAAGCT GTTATTTCTT CCGATGATCC GAACGCCGTA 
CAAAAACTAC AGGAAAAGCT CACTCACCTG GAGGAGGTGC AGCAGTTTAT GAAAGATGCG 
AACGTATGCA TCCGAAAAAA CAATAAAGAC GGCTTTTTAG CACTCAGCCT CGCCACCGAA 
GACATGTGGC AGCAACTTAG TAATCCGCGC TTTGGCGCAA AGGGATTTCC ACCGTATAAG 
CTAACTAATA ACAATCAGAA CATGCGGCGC ATAAAGGAGC GCATTAAAGA GCTGGAGGCG 
GCGACCACCC GCGAGTCAAA AGAAACGGTT ATGAACGGGG TGATATTCCG TGAAAACGTT 
GAACTCAATC GGGTGCAATT GATCTTTCCC CGCAAACCCA TTGAATCTGC CCGCAAAATG 
TGCAGAAAGT GGGGACTGAT ATGGGCGCCG AGCGAGGGAG CGTGGCAACG CCAGTTGAAC 
AGCAACGGCG TATTCTGCGC CCAACAAGTC CTTCAACTGA TCGGGGAAAA TTATTGA
 
Protein sequence
MRFSFEQHEA VISSDDPNAV QKLQEKLTHL EEVQQFMKDA NVCIRKNNKD GFLALSLATE 
DMWQQLSNPR FGAKGFPPYK LTNNNQNMRR IKERIKELEA ATTRESKETV MNGVIFRENV 
ELNRVQLIFP RKPIESARKM CRKWGLIWAP SEGAWQRQLN SNGVFCAQQV LQLIGENY