Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3133 |
Symbol | |
ID | 8359298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3862619 |
End bp | 3864949 |
Gene Length | 2331 bp |
Protein Length | 776 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965306 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_003122802 |
Protein GI | 256422149 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.989614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.593866 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCATC CTTTTTTACA GGTGAACAAA CTCCATGCAC AATCGCAGAC AAACGCAGCT CGTACCGGTG ATTTGCGCGG ACAGATCACT ACAGAAACGG GGCAACCATT GGCGGATATC ACCGTAAGAC TACATGGCAC CGGTCATGGT ACAGTAACGG ATACGGAGGG CCGCTTTACG TTTTCAAACA TCCCTGAAGG GACATATACA CTCGCAGCCA GCGGCGTAGG TTACCACACT GGTAAACACC CGGCTGTTGT CACCGGCGGA CAAACAACCT CTCTCTCCTT TCAGCTGAAC AGCCATACCG GCCAGCTATC GGAAGTAACA GTGAGTACCG CACAGGTATC CTCCTTTGCC GGTATTAATA AAATAGCGGT TCCTGTCAGA GACTTACCGC TGACCACCTC CGCAGTTTCT GCCCGTACAC TTGAACAAAG AGGGACAGAC GATCTGGGAG AAGCCATAAA AAACACGACA GGCGTACGTG CCAATACTAC CTATGGCGGT TTCCAGCACT TCACTATCCG TGGTTTCAAC AACTTTGTGT TACTCGTAGA CGGTGTCAGA GATGAACGTC ATAACATCTC TACCAGTGCC CCCAGTACGA ACCTGGCTAA TATTGAGCGT ATTGAAGTAC TGAAAGGACC CGCCTCTGTA TTATTTGGGC ATTCCGCACT GGGTGGTATC ATTAACCTGG TACGCAAACG TCCTTCTAAG GAACAGAAAG CAGAATTCTC CGCCTCTTAT GGCAGCTTTA ATACCCGTCG TATGCGTGCT GGTGCAGGTG GTGCAATCAA TAATAAACTC GCCTACAGAG TAGACGTCGG ATTATCAGAA ACAGATGGCT ATCGCCAATC AGGCGTCAAT ACTAACAATG CTTATCTTGC CTTAGAATAC ACACCAACCT CGCGTGACAA CTTCTATCTG AGTGTTGGCG CTAACAAAGA CAAATATGAT ACAGATGCAG GTATTCCCGT AATGGAAGGC GGTAAGATCG CCCCGGGTAT GAGCGTTGAT ACACGTTACA ATGATCCCGC GGATTTCCTG AAGAATACCC GCTACGATTT CCAGCTGCGA TATACGCATC AGTTCAACAG TAAACTCGTA CTGTCTGACC AACTGTCTTA CTCCTACGAT AACATCGATT ATCTTTCAAC AGAGGAACTG ACCTTCAACG AAGGAATGGA CTCGCTGACA CGTACCTCTC CCCTGTATTT TAATCATATC ACCAAACCCC TGCAAAACCA GCTGGAGCTG ACGTATACGA CGCAAACAGG TAATATCGGG CATAAATTAT TGTTTGGTTA TTCCCTCAGC ATCTTAGATC GTAAAACTTA CAACGGTAAT ATTTCTGGTA GCGGACTTTA TGCACAGATC GCGGTACAAA ATCCGGTGCT GAGTCAGGGT AATATCGATT ATTATCAGAC ACAGTACAGG GCGACAGAAG AGCAGGTACA TGGCTTCTAT GTACAGGAAT GGCTGAAGTT ATCGGATAAA CTGAAAGCAT TGGCGGGCCT CCGTTATGAT CTCTTCAGGG GCACTTATTA TACCAATAAG ATAGACAGAA CTCACCATGT AACAGATAAA GGCGCCAAAA CAGACATCCC GTCTTCCGCA TTCACGTACC GCGCAGGACT GGTATATCAG CCCATTGAAG CATTGTCCGT ATACGGGTCT TACTCCACCT ATTTCAAACC TTCCCGCAGG GTTGCACCTA ATGGTGAAAC CTTTGATCCG GAAGATGGTT ACCAGGCAGA ATTCGGTTCC CGGCTGGACC TGAGCAAAGC ATGGTCACTC ACTGGTTCGC TTTATTATAT GAGAAAGAAT AACCAGGTGG AGAGTCTGCC GGGTGGTCTA TACAAACGTG TTGGTGCTGC GGATTCCAAA GGATATGAAA TCGAATTGCA AGGTAGTCCG CTGGCAGGGC TTGATGTCAA TGCCGGGTAT ACATTTACGG AAGCAAAGTA TCGTCCTTTT GCAGGAAGTG AGATCAATGC TGTTGCAGGC AAAACAGTGG CGCTGGCGCC TGAACACATG GCCAACATAT GGGTAAACTA TCAACTGCAA CAAACTGCCT TACGTGGTCT GAGTCTGGGG ATGGGTATGA ATTACATGAG TGATACTTAT GCCAACAGTA ATAATACATA TGTATTGCCG GCATATACCA TACTGGATGC AGCCATTGGC TACCAGACCG GTAAAATTGG GCTGCGGTTG AATGTAAACA ATATCGCCAA CGAGCGTTAC TTCGCCAATG TGATTATTAC AAATCAGTTC TATCCGGGTG CTACCAGGAA TTATCTGCTG ACTTTTAAAT ATTCCCTCTG A
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Protein sequence | MVHPFLQVNK LHAQSQTNAA RTGDLRGQIT TETGQPLADI TVRLHGTGHG TVTDTEGRFT FSNIPEGTYT LAASGVGYHT GKHPAVVTGG QTTSLSFQLN SHTGQLSEVT VSTAQVSSFA GINKIAVPVR DLPLTTSAVS ARTLEQRGTD DLGEAIKNTT GVRANTTYGG FQHFTIRGFN NFVLLVDGVR DERHNISTSA PSTNLANIER IEVLKGPASV LFGHSALGGI INLVRKRPSK EQKAEFSASY GSFNTRRMRA GAGGAINNKL AYRVDVGLSE TDGYRQSGVN TNNAYLALEY TPTSRDNFYL SVGANKDKYD TDAGIPVMEG GKIAPGMSVD TRYNDPADFL KNTRYDFQLR YTHQFNSKLV LSDQLSYSYD NIDYLSTEEL TFNEGMDSLT RTSPLYFNHI TKPLQNQLEL TYTTQTGNIG HKLLFGYSLS ILDRKTYNGN ISGSGLYAQI AVQNPVLSQG NIDYYQTQYR ATEEQVHGFY VQEWLKLSDK LKALAGLRYD LFRGTYYTNK IDRTHHVTDK GAKTDIPSSA FTYRAGLVYQ PIEALSVYGS YSTYFKPSRR VAPNGETFDP EDGYQAEFGS RLDLSKAWSL TGSLYYMRKN NQVESLPGGL YKRVGAADSK GYEIELQGSP LAGLDVNAGY TFTEAKYRPF AGSEINAVAG KTVALAPEHM ANIWVNYQLQ QTALRGLSLG MGMNYMSDTY ANSNNTYVLP AYTILDAAIG YQTGKIGLRL NVNNIANERY FANVIITNQF YPGATRNYLL TFKYSL
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