Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3122 |
Symbol | |
ID | 8359287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3840917 |
End bp | 3841867 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644965295 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_003122791 |
Protein GI | 256422138 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0237449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.801665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAG AACAGCTGAC TGATCTGACT GCTAAGTACC TGAAAGGTAC TGCCACTCCT GAGGAGCATG CCTTGCTGGA AAAATGGTAT TATTCCTTTA ATCAGCAGGA ATTGAGCATC AACCTGCCAG AAGAGGACGA AGCTGCGCTG GAGGCAAGGA TGAAGAAGCA GATCGATCAG CGGGTAAAAG CCCATCATCG TTCACGACGG TCATTGGTAA AACGCTTATC AGCATGGCAG ATGGCGGCAG GCGCATTGCT GCTGCTTACA GGAGGATTGC TCACTGTGTT TTTCAGCAAC AGAGCCGTTT ATAAGGCACT ACGGTATCCA CAGCAGATCG TGCTGAAAGA TGGAAGTAAG GTGTGGCTCA ATGCTGAAAC CCGCCTGGTA TATACAGATT TTCCGTTTTT CAACGAACGC AAACTGGATC TGACAGGGGA AGCCTATTTC GATGTAGCCA GCGATCCGGA GAAGCCCTTT ATCATACAGT CGGGTAGTAT GACGACACAG GTACTGGGCA CCGCATTCAA TATCAAAGCT TATCCTGACG AGCCTTTTTA TATCACGGTA ACAAGTGGTA AAGTCAGACT GGAGGACAAA CAAACAAAAA CAGTTACTGT ACTGACATCT AATAAACAAC TGAAATATGC GAGCCAGCAT CCACCGGTAC TGAAGGAAGT AGTATCAGCC AACGCACATG CCTGGACAAG CGGACAACTG GAGTTTTATG ATCAGTCTTT CGGGGAAATA GCCCGGGCCA TCAACAGAAA ATATCATGTT AAAGTAGTAT TCGCCAACAA CACGTTAGAG CAGTGTATGA TCACTGCCAG TTTTGAGAAA GAATCAGCAG TATCCCGTGT GATAGATCTA CTTTGTAAGA TCAATAATAC AACATATACC TTCAGTGCAG ACAGTAGCAT TGTGACGCTG GAAGGAAAAG GTTGTCAGTG A
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Protein sequence | MTKEQLTDLT AKYLKGTATP EEHALLEKWY YSFNQQELSI NLPEEDEAAL EARMKKQIDQ RVKAHHRSRR SLVKRLSAWQ MAAGALLLLT GGLLTVFFSN RAVYKALRYP QQIVLKDGSK VWLNAETRLV YTDFPFFNER KLDLTGEAYF DVASDPEKPF IIQSGSMTTQ VLGTAFNIKA YPDEPFYITV TSGKVRLEDK QTKTVTVLTS NKQLKYASQH PPVLKEVVSA NAHAWTSGQL EFYDQSFGEI ARAINRKYHV KVVFANNTLE QCMITASFEK ESAVSRVIDL LCKINNTTYT FSADSSIVTL EGKGCQ
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