| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2983 |
|---|
| Symbol | |
|---|
| ID | 8359146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 3677534 |
|---|
| End bp | 3678100 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644965162 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003122660 |
|---|
| Protein GI | 256422007 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.206465 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAA AAACGATCAG GGCATTGTAC GATGAGGAAT CGATCACTGT TTATCAGGCA
TACAATGGCC TTATTGCAAA AAGAGCGGTA GAAGCGCAGA CATTCACAAC CCCTCCGTTT
AGAAGAGATA GAATGACCTG GATCAAACCC TCTTTCTGCT GGATGATGTA TCGTTCCGGA
TGGGCGACCA AAGAAGACCA GGAGTATATC CTGGCGATTA AAATAAAGCG TAGCGGATTT
GAATGGGCCT TACAAAATGC AGTATTATCG AAATTTGATC ATAAGATCCA TAGCACTACT
AACGAGTGGA ACAGGTTACT GAAAGCATCT CCGGTAAGGG TGCAATGGGA CCCGGAAAGA
GATATTTATC TGCAACCAAC CGATCAACGT GCCCTTCAGA TCGGGATATC GGGTACAGCT
GTTGATCAAT ATATTTCTGA ATGGATCATC GGGATAGAAG ATATCACCGC TTATTCTCAA
CATATCGGAC AGTTGGTGAA GGTACGTAAG ATAGAGGAAG CGATGGCATT ACTGCCCCAG
GAACGCCCTT ACCCTTTGCC TGTATAG
|
|---|
| Protein sequence | MKEKTIRALY DEESITVYQA YNGLIAKRAV EAQTFTTPPF RRDRMTWIKP SFCWMMYRSG
WATKEDQEYI LAIKIKRSGF EWALQNAVLS KFDHKIHSTT NEWNRLLKAS PVRVQWDPER
DIYLQPTDQR ALQIGISGTA VDQYISEWII GIEDITAYSQ HIGQLVKVRK IEEAMALLPQ
ERPYPLPV
|
|---|
| |