| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2949 |
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| Symbol | |
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| ID | 8359112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3630596 |
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| End bp | 3631186 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644965130 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003122628 |
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| Protein GI | 256421975 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.713286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.15342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGACG GACAATTTAT TGATGCTTCT GGGCTTTGCC GCCGCATTGC AGCTGGTGAT
GAAGCCGCAT TTAGCCAGCT GGTAGAGCTG TTCGCTCCCC GCCTTCAGGC TATGGCGGCC
CGTATTACCG GCTCTGTAGC TGTGGCAGAC GACCTCGTTC AGGATACCTT CCTGAAAGTA
TGGCTCTCGC GCGACCAATT GAGCGATGTT GCCCAACCGG CAGCCTGGAT AAAAAAAATA
TGCTTTTACC GCGCAGTAAA CCATGTGCGC CGGCAATCTA TTCACGATCA CGTGATAGAC
GCCGTCGGAC TACAAAAAGA AAATACCGTA AAAACGGCTG AGATCGTGGA GTTCCGACAG
CTACTGACGA TGGTGAATAC CGCCGTGCAG CAACTCCCTG AAAAACAACG CCAGGTATAC
CGTCTGAGCC GGGAACAGGC CCTTAGTATC AGCGAGATTG CCGAGCATAT GGATCTGGCG
GTTAGCACCG TCAAAAATCT GATGGTCATG GCACTTAAAA GCATCCGCAC TTCCCTGCAA
AAAAGTGGCT ACCCACTATT TGTCCTGCTT TTATTAGACT TCCTTTATTA A
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| Protein sequence | MNDGQFIDAS GLCRRIAAGD EAAFSQLVEL FAPRLQAMAA RITGSVAVAD DLVQDTFLKV
WLSRDQLSDV AQPAAWIKKI CFYRAVNHVR RQSIHDHVID AVGLQKENTV KTAEIVEFRQ
LLTMVNTAVQ QLPEKQRQVY RLSREQALSI SEIAEHMDLA VSTVKNLMVM ALKSIRTSLQ
KSGYPLFVLL LLDFLY
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